| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3236 |
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| Symbol | |
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| ID | 3965709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4123453 |
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| End bp | 4125189 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637922333 |
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| Product | GAF domain-containing protein |
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| Protein accession | YP_528705 |
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| Protein GI | 90022878 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.604941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCC CAAATACTGC CAGTAAATTA TGGTTGCGCT TACAGTGCCA GATGATAAAT
GGCGTGGCGC AAGGGGTATT GGTGCAAGCA GATAGCGCTG GTAAACCCTT AATGGTGGCT
AAATGGCCGC AGGAACTGAC TCTGGCCGAG CCAATGGCCG ATGTAACCAA GCGCGTATTT
GCAAAGCAGG CTATGCAAAT GCTGCGCGAC ACCGACGGCA CTATTTTGCT TGGGCACCCG
CTAGAAATAA ACAAAGTGTT TTGGGGCGTG GTTGTAGTGC GCATGAGCCA CAGGGATGCA
ACCGCTGTTA CCGCGGCCAT AAAGCTGCTT AAGTGGGGTG AAACTTGGCT GCAGTACACG
TTGTACAAGC AAGATGTACC TAATCTAGAA CCTGTAATTG CTATTTTAAA TAAAGTAGCC
GACGAGCCTT CATTAGCAGA AGCCGCTATT TCGTTGGTTA ACTATGTGGC CAGTTTTGTA
GCCGCCGAAC GTGTGTGCCT AGGCTTGGTC TCCCAACAGG GGGTTGCGCT ACAAGCTGTC
TCTTTTTCTG CCCATTTCGA CCGTCGAACG CCTGTGATGC TGGGTATTGC GGCTGCCATG
GAAGAGTGCG TGGCGGCGAA TCAAAATATA TTTATAGATA CAACGAGTGA ATTAGAACAG
GCTGCTTCGG CGTGTCCTGC ACATTATAGG CTTATACAAA GCAACTCCCA GCGAGCATTG
CGTTCTGTAC TGCTAAAAAA TGGCGAACGC GTCGTTGCGG TAATGTTGAT AGAGCACAGT
GCTAGCCAAG CTCTAGGGGA AGGGCCTGTT GCATCGCTTA TGGCAATTGC CCCGCTTATA
GCGCAAGCAA TCGATTTTAA AATTGCCGCA GCAAAAGGTG TGTCTAAACA ATTAGCCGAG
CGCGCACGCG GCAGGTTAGC GAAGTGGATT GGGCCGGGGA GCTGGCTGGC AAAAACACTT
GTCGTTAGCG CACTTATGTT TGTGGTTGTT ATGTTGCTCC CCGGGCAATA CCGCGTAACG
GGTGAAGCTG TGTTACAGGG TACGCAGAAG CATTTGGTTG TAGCTAGCCA AGACGGCTAT
TTAGCCAAAG TGAATGTTCG GCCCGGCGAT CAAGTACTTG TAGACGATGT GCTGGCGCAA
TTAGATGACG ACGACCTGCG CTTACAGCGT CGAAAATTAA TTAGCGAATT ACAACAGCAC
CGCCACACCT ACAACAATGC GCTGGCCAAT TCTGAGCGTG CGCAAGCGAC CATTGCCAGC
GCCTTGGTTG ATCAAGCCAC TATTCAACTA GAATTAATTG AGCAGCAATT AAAGCGCACA
CTTTTGCGTT CACCCATAGA AGGTGTAGTG GTATCGGAAG ATGTTAGTCA GTCGGTGGGT
GCGCCAGTAT CACAGGGTGA GCGACTTTTT GAAATAGTCG CCAACCAGCA ATACCGCGTG
TTGTTGTATA TAGATGAGCG CGATATTGCT TACATAAAAA AACAACAGCG CGGCCACGTA
GTATTAACCA GCTTGCCGGG TGAAGTATTT GAATTTGATG TGTTAAAAAT TACCCCCCTT
AACGAAGTGC GGGAAGGGCG AAATTATTTT AGGGTAGAGG CGCAGTTGCT CGCGGCACCA
GCCACTCTTA GACCTGGTAT GACCGGTAAC GGCAAAATTG CCGTGGGCGA ATTTAAACGC
GGGTGGATTT GGTTTCACAA TGCCGTTGAT TGGTTTCGCG TTAGGTTTTG GTGGTAA
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| Protein sequence | MPAPNTASKL WLRLQCQMIN GVAQGVLVQA DSAGKPLMVA KWPQELTLAE PMADVTKRVF
AKQAMQMLRD TDGTILLGHP LEINKVFWGV VVVRMSHRDA TAVTAAIKLL KWGETWLQYT
LYKQDVPNLE PVIAILNKVA DEPSLAEAAI SLVNYVASFV AAERVCLGLV SQQGVALQAV
SFSAHFDRRT PVMLGIAAAM EECVAANQNI FIDTTSELEQ AASACPAHYR LIQSNSQRAL
RSVLLKNGER VVAVMLIEHS ASQALGEGPV ASLMAIAPLI AQAIDFKIAA AKGVSKQLAE
RARGRLAKWI GPGSWLAKTL VVSALMFVVV MLLPGQYRVT GEAVLQGTQK HLVVASQDGY
LAKVNVRPGD QVLVDDVLAQ LDDDDLRLQR RKLISELQQH RHTYNNALAN SERAQATIAS
ALVDQATIQL ELIEQQLKRT LLRSPIEGVV VSEDVSQSVG APVSQGERLF EIVANQQYRV
LLYIDERDIA YIKKQQRGHV VLTSLPGEVF EFDVLKITPL NEVREGRNYF RVEAQLLAAP
ATLRPGMTGN GKIAVGEFKR GWIWFHNAVD WFRVRFWW
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