Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3231 |
Symbol | |
ID | 3965704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4104411 |
End bp | 4105184 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637922328 |
Product | Na+/H+ antiporter NhaA |
Protein accession | YP_528700 |
Protein GI | 90022873 |
COG category | [S] Function unknown |
COG ID | [COG3384] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.674705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.563929 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACCGA GCCTTTTCAT TTCTCACGGC GCCCCTAACA GGGTGCTGCA CACGTCACCA GCGAATTTGT TTTTACAAGA GCTTGGCAGC TCACTGCCAA CCCCAAAAGC AATTGTTATT GTTTCTGCCC ACTGGCAGCA CGCAGGGGTT GCGATTACCG CCACAGGGCA ACATAACACT ATTCACGACT TTGCCGGTTT TGAGCACGCC CTATATCAAC AGCAATACCC AGCCCAGCAA CCGGCATGGT TAACCGATGA ACTAAGCCAA GCATTGCGCC CTTTTGCCTC ACACTTAAGC GCAGATATAA AGATTAGCGA AAGAGGCTTA GACCACGGCG CGTGGTCGGT GTTAAGTTTA ATGTACCCCA ATGCAGATAT TCCCGTCGCA GCGCTTAGCT TGCCCACAAC GCAAGACCTA AACGTATATT TAACCCTAGG CCAAGCGTTA CAACCTTTGC GCGAAAAAAA TATTTTAATT ATTGCCAGCG GCAGCGCTAC GCACAATTTG GGGTTACTAA ATAGAAACGG CGACACACCG ATATGGGCGG AGGAATTTGT ATATTGGTTA CACCAAGCTG TTACAAATAA AGACTATACC GCCCTAACTC AGCTGTACAA CAGCGCCCCA CACGCAGCTA TTGCACACCC CACACTAGAA CACTACAGCC CGCTGCTTGT TGCTGCTGGT GCCGCCTACG GCAACACAGG CAAACCCATT CACAACAGCT ACGAACTAGG CTCGCTAAAC AATTCAAGTT TTAGCTTCGA CTAA
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Protein sequence | MLPSLFISHG APNRVLHTSP ANLFLQELGS SLPTPKAIVI VSAHWQHAGV AITATGQHNT IHDFAGFEHA LYQQQYPAQQ PAWLTDELSQ ALRPFASHLS ADIKISERGL DHGAWSVLSL MYPNADIPVA ALSLPTTQDL NVYLTLGQAL QPLREKNILI IASGSATHNL GLLNRNGDTP IWAEEFVYWL HQAVTNKDYT ALTQLYNSAP HAAIAHPTLE HYSPLLVAAG AAYGNTGKPI HNSYELGSLN NSSFSFD
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