Gene Sde_3231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3231 
Symbol 
ID3965704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4104411 
End bp4105184 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content49% 
IMG OID637922328 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_528700 
Protein GI90022873 
COG category[S] Function unknown 
COG ID[COG3384] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.674705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.563929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACCGA GCCTTTTCAT TTCTCACGGC GCCCCTAACA GGGTGCTGCA CACGTCACCA 
GCGAATTTGT TTTTACAAGA GCTTGGCAGC TCACTGCCAA CCCCAAAAGC AATTGTTATT
GTTTCTGCCC ACTGGCAGCA CGCAGGGGTT GCGATTACCG CCACAGGGCA ACATAACACT
ATTCACGACT TTGCCGGTTT TGAGCACGCC CTATATCAAC AGCAATACCC AGCCCAGCAA
CCGGCATGGT TAACCGATGA ACTAAGCCAA GCATTGCGCC CTTTTGCCTC ACACTTAAGC
GCAGATATAA AGATTAGCGA AAGAGGCTTA GACCACGGCG CGTGGTCGGT GTTAAGTTTA
ATGTACCCCA ATGCAGATAT TCCCGTCGCA GCGCTTAGCT TGCCCACAAC GCAAGACCTA
AACGTATATT TAACCCTAGG CCAAGCGTTA CAACCTTTGC GCGAAAAAAA TATTTTAATT
ATTGCCAGCG GCAGCGCTAC GCACAATTTG GGGTTACTAA ATAGAAACGG CGACACACCG
ATATGGGCGG AGGAATTTGT ATATTGGTTA CACCAAGCTG TTACAAATAA AGACTATACC
GCCCTAACTC AGCTGTACAA CAGCGCCCCA CACGCAGCTA TTGCACACCC CACACTAGAA
CACTACAGCC CGCTGCTTGT TGCTGCTGGT GCCGCCTACG GCAACACAGG CAAACCCATT
CACAACAGCT ACGAACTAGG CTCGCTAAAC AATTCAAGTT TTAGCTTCGA CTAA
 
Protein sequence
MLPSLFISHG APNRVLHTSP ANLFLQELGS SLPTPKAIVI VSAHWQHAGV AITATGQHNT 
IHDFAGFEHA LYQQQYPAQQ PAWLTDELSQ ALRPFASHLS ADIKISERGL DHGAWSVLSL
MYPNADIPVA ALSLPTTQDL NVYLTLGQAL QPLREKNILI IASGSATHNL GLLNRNGDTP
IWAEEFVYWL HQAVTNKDYT ALTQLYNSAP HAAIAHPTLE HYSPLLVAAG AAYGNTGKPI
HNSYELGSLN NSSFSFD