Gene Sde_3207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3207 
Symbol 
ID3965680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4083243 
End bp4084145 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content52% 
IMG OID637922304 
Producthypothetical protein 
Protein accessionYP_528676 
Protein GI90022849 
COG category[R] General function prediction only 
COG ID[COG4240] Predicted kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCAAA AATATATTCT CGATGCCATT AGCCAACACG CGTTACCGCA AGACTTTACT 
AGCGCAGTAA GTGATCACTA CGCCCCTGTA GCCGCTAGCA TAGCTAAACG CTACCAAACC
AAGGGCACGC CACTGCTGGT TGGCATTCAG GGCACCCAAG GTAGCGGCAA AAGCACAATG
GCGGATTTCA CCCAGCTATT GCTGCAACAC GAGCACAACC TGAATGTGGC GGTGGTGTCT
ATCGACGACT TTTACCACAC CGCAGCCACG CGCCAACAAC TTGCAGGCGA GGTTCACCCA
TTGCTCGCAA CGCGCGGCGT ACCCGGCACA CACGACCTCG CTTTAGCATT TAGCACACTG
CACGCCCTCA GCCGACTCGA GTCAGGCGAA ACCCTCGCCA TCCCCCGTTT TAACAAAGCC
ATAGACGACC GCGCACCACA AGCGCAATGG CCACAGGTAA ATGGGCCTGT AGACGTAATT
ATTTTTGAAG GTTGGTGCAT AGGCATAGGC CCACAAACCG ACAGCGAAGT GATACACCCC
ATGAACAAGC TAGAGCTGGA AGAAGACCCA GATGGCACTT GGCGACAATA CGTAAATAAT
CAACTGGCAA GCGACTACGC AAAACTATTT AACATGCTCG ACTATTTAGT GGTTATAACC
GCCCCTAGCT TCGATGTGGT ATTTGAATGG CGCTCGTTGC AAGAGCAAAA GTTGGCCGCC
AAATTAAAAA ACGCCCCGCC CGAGCAGCAG GCCAAAATAC AAACCGAAGC GCAGCTGCGC
CGTTTTATTG CCCATTACCA ACGCTTGACC TGCCACGGGT TACAACATTT ACCGGCGCAA
GCCGATTGGG TACTACATTT AGATGAGCAC CACCGCATTA CCGGTTCACA ACACAACAGC
TGA
 
Protein sequence
MVQKYILDAI SQHALPQDFT SAVSDHYAPV AASIAKRYQT KGTPLLVGIQ GTQGSGKSTM 
ADFTQLLLQH EHNLNVAVVS IDDFYHTAAT RQQLAGEVHP LLATRGVPGT HDLALAFSTL
HALSRLESGE TLAIPRFNKA IDDRAPQAQW PQVNGPVDVI IFEGWCIGIG PQTDSEVIHP
MNKLELEEDP DGTWRQYVNN QLASDYAKLF NMLDYLVVIT APSFDVVFEW RSLQEQKLAA
KLKNAPPEQQ AKIQTEAQLR RFIAHYQRLT CHGLQHLPAQ ADWVLHLDEH HRITGSQHNS