| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3093 |
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| Symbol | |
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| ID | 3965474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3945583 |
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| End bp | 3946989 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922190 |
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| Product | trypsin-like serine proteases typically periplasmic |
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| Protein accession | YP_528562 |
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| Protein GI | 90022735 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0647718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTGTT ACAAAGGCCT TAGCGCTGTA GTAATAAGGT GTAACGCTTT ACCCCTAAAA
GGAGTAGTAC GCGTTTTGAA AACAACAAAA TATTCGGCCA TAGGCCAATG CGCACATTGG
CTAGCAGCGG TATCGCTAAG TGTGTGTGCG CTTATTAGCG GGCCAGCCTA CACACAAGAG
CTTGCCCCCA ATAATAAGCC GGCAGTGGAT AGCGGCCAGC AAGCCAAGCA CACCATTTCC
ACCTTTAAAG ATTCTATTTT TCAGGTGCGC ATAATAAATG TAGATTCCAA AAACGCGCGC
TCGTTTGGCT CTGGCTTTTA TATTGGCGAT GGCGGCCTAA TAGCAACCAA TTACCATGTT
ATTAACTCTG TATTGTTCGA GCCAGAAAAC TACCGCGCAA TAATAGAAAT AGGCGACGAA
GAAATACCCC TAAACATAGA AGCGGTAGAT GCCATTAGCG ATGTGGCTAT TTTATCGGTA
CCGGTTAAAC GCCCAGCGCT AGCGCTAAGC GCCGTACCCC CCGCGCGCGG CGAGCGCTTA
TATTCTGTGG GCAACCCGCA CGACCTAGGC ATGACAATAG TAGAAGGCAA CTACAACGGC
CTTATCGATA ACCGCTTTTT CGATCAAATA CACTTCTCTG GTGCGCTTAA CCCCGGCATG
AGCGGTGGCC CAAACCTAAA TGCCAATGGC GAAGTGGTAG GCCTAAACGT GGCTACCAAA
GGCAACCAAG TGGGTTTTTT AGTACCCGTA GATAAACTTA AAGCGCTACT GGTAGATTTA
GAAGTAGGCA AATACAGCGA AGAAGAGCTA CAACAAAAAG TAGGCAAGCA AATTCAAAAG
GCAAGCCACT ACGTAGTAAC CGAACTGCTC TCACCCGATT GGCCAATAGA AGATATGGGC
GAGGCCCTAG TAGTTGGCAA AGTGCACCCC AACTTACATT GCTGGGGCGA TAGCGACGAA
GATGAAGATA ACCACCTAAT AGTTATAAAG CGTGGCTGCC ACAGCGCGTC GTCGTTCCCT
ATTTATAAAA CCCTTACATC GGGTTTTGTA GAATACGAAT TTTGGCATAT ACAAGGTAAA
GATTGGCCAG AGTATTCCTA TTACCGCATG CTACAAAAAC AAGTATCCCA CGCGCGCCCA
GGCAACCAAG CCGGTGAAGA CGACGTAGAA AACTACACAT GCGAAATAGA TATAGTAACT
CGCGAGCAAG ATGGCCTAAA ACGCAAAATT TCTTACTGCA CTCGCCCTTA CAAAAAATTT
AAAGGCCTGT ACGATGTATT TTATATGGGC GTTACGCTCG ATAAATCACA CGTAGCGGTT
ATGGAGCACT TCACCTTATC TGGCGTAACC CAAGAGGATT CGGCCCAGTT TTTAGAAAAA
TTTATTAAAC AGGTGGCATG GCAATGA
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| Protein sequence | MGCYKGLSAV VIRCNALPLK GVVRVLKTTK YSAIGQCAHW LAAVSLSVCA LISGPAYTQE
LAPNNKPAVD SGQQAKHTIS TFKDSIFQVR IINVDSKNAR SFGSGFYIGD GGLIATNYHV
INSVLFEPEN YRAIIEIGDE EIPLNIEAVD AISDVAILSV PVKRPALALS AVPPARGERL
YSVGNPHDLG MTIVEGNYNG LIDNRFFDQI HFSGALNPGM SGGPNLNANG EVVGLNVATK
GNQVGFLVPV DKLKALLVDL EVGKYSEEEL QQKVGKQIQK ASHYVVTELL SPDWPIEDMG
EALVVGKVHP NLHCWGDSDE DEDNHLIVIK RGCHSASSFP IYKTLTSGFV EYEFWHIQGK
DWPEYSYYRM LQKQVSHARP GNQAGEDDVE NYTCEIDIVT REQDGLKRKI SYCTRPYKKF
KGLYDVFYMG VTLDKSHVAV MEHFTLSGVT QEDSAQFLEK FIKQVAWQ
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