Gene Sde_3092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3092 
Symbol 
ID3965473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3944546 
End bp3945586 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content45% 
IMG OID637922189 
Producthypothetical protein 
Protein accessionYP_528561 
Protein GI90022734 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAATTC AAAGTATAGA CAGAAGCGGC CATGTAATAG CAATACAAAA ATACGTAGGT 
ACCCGTGTAG ATATAGGGCG CGGGTTTAGC AACCAGCACA TTATTAACGA CCCCTACGCC
GATGGTAAAC ATGTACGCGT AGAGTACGAC CATCAACACG AAGTATTTTT TGTATCCGAT
TTAGAATCGG CAAACGGCAC AACAATATTG CGCGGCAAAC AAATAATAAA CGTGAATGCC
CACCCCACAC CTTTGCAAGC GGGCGACACA TTGGTAGTGG GCAAAACCCA CATGCGCATA
GTAACCGAGC ACACCCCCGT GCCACCGCCT TTGCGCTTTT CTAAATTTGA AGAAACCTAC
AGGCTACTTG GCCAGTGGTG GGTATTTATA ATTGCCAGTA TTGCAGTGCT TAGCTTAAAT
GCATGGAGCA TATACATAGA AGCCCCCTTT AGCGAAACAC TTACCAAACA ATATGCCGAG
GGTATATATG TAGTGCTAGT TGCGCTTGGC TTTGCGGGGG TATGGTCTAT TGCCGCCAAA
CTACAGCATT TAGAAGTAAA GTTTTTACTC TATGCCAACC TCGCGCTACT GGCCGAAAGT
ATATTTATGC TGCTAGACCT TTCCGAATGG GTAATAAAAT TCAACATGGC ATGGCTATGG
TTAAACGGCT ATACCCCAGA ACTAGTAGCG ATGGCTGTAT TGTTTGTAGG CCTATATATA
TGCGCCTACC AAGCCACACG TTTAAGGCTG CGCGGCAGAA TAATATTCGC ATCCATCGCG
CCCGCATTAA TTGTGCTTAC CACAACAATG AAGCTACTAG ATAAAGACGA CTTTAAATCT
AGGCCCGATT ACAAAATGAT AGTAGTAGCC CCCAGCTGGC AACTGCGCGG CAGCGTAACG
GAAGATAAAT TTTTGGCGGC AACCAAGAAG GCTTATAAAG AGGCTGCGCC AATTGAGAAG
AAAATGAGTG GTGCTAAGAA AGAGAATTTG ATGGAGGATG ATGGTGAATT GGGCAGTGGT
TCTGTAGGTG TCATAGAATA G
 
Protein sequence
MIIQSIDRSG HVIAIQKYVG TRVDIGRGFS NQHIINDPYA DGKHVRVEYD HQHEVFFVSD 
LESANGTTIL RGKQIINVNA HPTPLQAGDT LVVGKTHMRI VTEHTPVPPP LRFSKFEETY
RLLGQWWVFI IASIAVLSLN AWSIYIEAPF SETLTKQYAE GIYVVLVALG FAGVWSIAAK
LQHLEVKFLL YANLALLAES IFMLLDLSEW VIKFNMAWLW LNGYTPELVA MAVLFVGLYI
CAYQATRLRL RGRIIFASIA PALIVLTTTM KLLDKDDFKS RPDYKMIVVA PSWQLRGSVT
EDKFLAATKK AYKEAAPIEK KMSGAKKENL MEDDGELGSG SVGVIE