| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3055 |
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| Symbol | |
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| ID | 3967660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3907844 |
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| End bp | 3908635 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637922152 |
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| Product | putative deoxyribonuclease |
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| Protein accession | YP_528524 |
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| Protein GI | 90022697 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00078525 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGGCCA AAAACATGAT AGATACTCAT TGTCATATAG ACTTCCCCAA ATTTGATGCA
GACAGGCAAG CAGTATTGGC CAGTAGCTTA CGCGCGGGCG TGCAAAAAAT AGTGGTGCCA
GGGGTAAGTG CAAGCCAGTG GCCAAAAATA CAAGCGCTAA TTGAACAAAC CCCCTCGTTA
TATTTTGCCG TAGGTGTGCA CCCTTGGTGG GTGAATCAAT CGGTAATTGC TAAGTTGGAA
TCGCTAGAGA GCGAAATAGC GACATTTTTA TCGCACAAAA AATGTGTTGC CGTTGGGGAA
TGTGGGTTAG ATAAGCTGTG CGATGTGCCC TTTGAATGGC AAGTTGATGT GCTTAATTAT
CATATTGAAT TAGCCAAACG CTTTTGCAAA CCCATTATTT TACACAGTGT GAAAGCCCAC
AATGCGACGT TGGTACATTT AAAAAATGGT GCGTTAACGC ACGGTGGTGT AGTACATGCA
TTTAGCGGAA GCACACAAGA AGCCGACCAA TATTGGCAGC AGGGGTTTTA CTTAGGTATA
GGTGGCACCA TTACTTACCC AAGGGCAAAT AAAACCCGCA AAGCCGTAGC CGCTATGCCA
TTAGATGCGT TGCTACTAGA AACCGATGCA CCGGATATGC CAATGAACGG CCGCCAAGGG
CTGCGCAATA GCCCAGAGTA TTTACCCGAA GTGGTAGCAG TAATTGCCGA GCTAAAAAAT
ATTAGCCCTA GCGAAGTTAT AGCAGCCACT ACGGCCAACG CGCAGAAGTT GTTCAATTTT
AACGGTGACT AA
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| Protein sequence | MLAKNMIDTH CHIDFPKFDA DRQAVLASSL RAGVQKIVVP GVSASQWPKI QALIEQTPSL
YFAVGVHPWW VNQSVIAKLE SLESEIATFL SHKKCVAVGE CGLDKLCDVP FEWQVDVLNY
HIELAKRFCK PIILHSVKAH NATLVHLKNG ALTHGGVVHA FSGSTQEADQ YWQQGFYLGI
GGTITYPRAN KTRKAVAAMP LDALLLETDA PDMPMNGRQG LRNSPEYLPE VVAVIAELKN
ISPSEVIAAT TANAQKLFNF NGD
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