Gene Sde_3044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3044 
Symbol 
ID3967649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3891557 
End bp3892138 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content40% 
IMG OID637922141 
Producthypothetical protein 
Protein accessionYP_528513 
Protein GI90022686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000703839 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGTAAGAG AAGCTTGCTT TTATCTGTTT AAAATAAACT ATACCTATCA ATATAGTACG 
AATTTGAGCT TTGGTAATGT TTTTTGGCTA GACTTGAGTG TTGAGCTTTT AGATTATTGT
AATGTAATTA GGTTAACCGG CAAGAGGCAG TTGGAGTTAA TATGCCGGGT TGCAGCAAAG
CTCATTCCCA ATGCAAATTT AATTAGCCTA TGGCGGTTTG GTGAGCATAA ACAAAAAGTA
ATAAGCCTTA TTAATTACGA TGTAGAGGCG CAGGAATTTA CGGAAGGGCT AGAGCTTAAC
CGCCGTGACT TTCCTGTTTA TTTTGATGCA ATTGTTGAGC GCGAGCTTTT AGTGGCTAGC
CGAGCGCGAG CACACCCTGT TACCAGCTGT TTTAATGAAA GCTATTTTGA GCCGCTAGAT
ATACACTCGT TGCTCGATTT TATTTTACAT AAAGAGTTTG CTCCCGTGGG TGTTATTTGC
TGCGAAAGTA AAGGTGCGGC AGTTAATTGG TCCGACGACG ATATTGAAAA CATTCGCATG
CTTGCTACGC AAATTTCTTA TTGTTTTGAG TTGCCCTGTT AG
 
Protein sequence
MVREACFYLF KINYTYQYST NLSFGNVFWL DLSVELLDYC NVIRLTGKRQ LELICRVAAK 
LIPNANLISL WRFGEHKQKV ISLINYDVEA QEFTEGLELN RRDFPVYFDA IVERELLVAS
RARAHPVTSC FNESYFEPLD IHSLLDFILH KEFAPVGVIC CESKGAAVNW SDDDIENIRM
LATQISYCFE LPC