| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3042 |
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| Symbol | |
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| ID | 3967706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3889329 |
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| End bp | 3890357 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922139 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_528511 |
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| Protein GI | 90022684 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000688276 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACCAA CAATTAAAGA TGTAGCTAAG CTCGCAGGGG TATCGTTTAA AACTGTTTCG
CGCGTAGTAA ACAAAGAGAG TACCGTTGGT GAAGCCCTGC AAGAAAAAGT ATGGAAAGCG
ATTAACGAGC TTGGTTATAA GCCTAATTTG TCTGCCCGTG GTTTGCGTGG CGCTGCATCG
TCCATAGGTT TTATTTACGA TAACCCCAAC AGCAACTACG TAATCGATAT GCAGCGCGGT
ATTCTTAACG AATGCCATAA GCGCGGCTAT GAGCTAGTTA TTCACCCGTG TAATGCATCT
GGCGAGCACA TTATTGATGA AGTGATCGAA ATGATCGATC GCAGCCGGGT AGGGGGCCTA
GTGCTCACAC CGCCTATTTC CGAAAACCCC GAAATACTCG CAGCTATTGC TAATAAAAAA
GTCGAATTCG TACGTATTTT ATCTGGCAGC GCCGCACCAG ATACATTGTC GCCTTGTGTT
TACATCGATG ACCGCACAGC GGCTTACACA ATTACGCAGC ACTTAATCGA TTTAAACCAC
AAAGATATCG CCTTTTTGGG CGGTGATGAA GAGCATAAAT CCAGTGGCGA ACGTTTGGAA
GGCTACCGCT CTGCCTTAGC AGATAACGGC ATCACCCCCC ACGAAAACCA TATATTACCC
GGTAAATACT CGTTTGAATC TGGAGTGGAG CGCACCCGTG CGTTACTCGA GCTAGATGGC
CCACGCCCAA CCGCGGTGTT TGCCTGTAAC GATGAAATTG CAGCGGGTAC CTTGTTTGCT
GCCCGTATTG CGGGTGTAGA TGTACCAAAT CAGCTCTCCA TAGTGGGGTT CGAAGATAGC
CCCTTTTCGC GCCAAGCCTG GCCAAACCTT ACTACGGCCC AGCAACCCAC TAGCACCATT
GCGCAGCGTG CCACTGCACT ACTAATTGAC ACCTTAAAGA GCCGCGCTGA AGGCTCGCAA
GTTGTTGAAA GTGAAGGGTT TTTACCTAAA CTTATTGTGC GCGACTCCTC CCAAACTGCC
CCAGTATAA
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| Protein sequence | MKPTIKDVAK LAGVSFKTVS RVVNKESTVG EALQEKVWKA INELGYKPNL SARGLRGAAS
SIGFIYDNPN SNYVIDMQRG ILNECHKRGY ELVIHPCNAS GEHIIDEVIE MIDRSRVGGL
VLTPPISENP EILAAIANKK VEFVRILSGS AAPDTLSPCV YIDDRTAAYT ITQHLIDLNH
KDIAFLGGDE EHKSSGERLE GYRSALADNG ITPHENHILP GKYSFESGVE RTRALLELDG
PRPTAVFACN DEIAAGTLFA ARIAGVDVPN QLSIVGFEDS PFSRQAWPNL TTAQQPTSTI
AQRATALLID TLKSRAEGSQ VVESEGFLPK LIVRDSSQTA PV
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