| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3031 |
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| Symbol | |
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| ID | 3967695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3871493 |
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| End bp | 3872512 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637922128 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_528500 |
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| Protein GI | 90022673 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000013989 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000160975 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGCCG CACCTATCAA TACTAATCCG AGCAGCCGCG CCCTTACGGC CCCAGCACTC
GAGGCGCTAG CGAACTACGC AGGGTGCAGA AACGCCACAA TCCACAGCAA AGGCGCAAAA
ACAGACACGT TAATTAACGG CCATTTCACC TTAAAGCGGG AGTTCGATGG CATATTGGTG
CATGCCTGCA ATATGGAAGA ACAAAAAGAT GCCCTAGTAG CCAGCCAGCA ACACGCTGGG
CTTACCTTTG GTGTATTGAT AGAAGGGAAA ATAACGTTTG GCTTTAATGG AGAGTTCGGC
ACTATAGAAG CTGCAAACGG CGCCCAGGGT TGGGCCACTA ACCTCACCCA AAACGCCGCA
TGGCAGCGCA AACTGACCAA CAAGCAGCAA GTGATTAAAC TTGTGGTTTC TGTACCGCCG
CAATGGATAA AACAGCACCT GTGGCAAAAC CCCGCCCCAG CCTTTTTAAA TAGGTTTATA
AGCACCCATT TAGCGCGAAC ACATTGGCTG GCATCCGGCA GTTTAGTGCG CCACGCAAAA
GCGGTAATGA GCAGCCACAG TAATAGCCCC AGTCAAGCCC TGCACTTCCA CGCCAATGTA
CTCGCATTTA TTGCGCAAGC ACTGGACGAC ATTGAAGCCA GCGGCGAGCG CATTTTTAAC
TTGCACAACC CTAACCGAAC CAGCCGGAGC CTTAGCAGCC AAGCTATAAA AGTGCAGCAG
CATTTAGAGC ACTGCATTAA TGAGCTGCAG CCGGGTGCTC ACATTCAATT GGAAGATATA
TCACATGCGC TGGGCATGAG TGTAAGCAAA TTGCAGCGTT TATCGAAAGC ACACTTTGGC
TGCACTATTG CCGAGTACAT TCGTATTCGT CGCCTAGAAA AAGCGCGCCA CGAAATTCAG
CACAACAATT TAAGTATTGG CGAAGCTGCT TTTTTAGCCG GCTATAATCA CAGGTCCAAC
TTCTCTAAGG CTTTCAAACA ATATTTCAAT TTATGCCCCG GCGACATAGC GCCGCAGTAA
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| Protein sequence | MTAAPINTNP SSRALTAPAL EALANYAGCR NATIHSKGAK TDTLINGHFT LKREFDGILV
HACNMEEQKD ALVASQQHAG LTFGVLIEGK ITFGFNGEFG TIEAANGAQG WATNLTQNAA
WQRKLTNKQQ VIKLVVSVPP QWIKQHLWQN PAPAFLNRFI STHLARTHWL ASGSLVRHAK
AVMSSHSNSP SQALHFHANV LAFIAQALDD IEASGERIFN LHNPNRTSRS LSSQAIKVQQ
HLEHCINELQ PGAHIQLEDI SHALGMSVSK LQRLSKAHFG CTIAEYIRIR RLEKARHEIQ
HNNLSIGEAA FLAGYNHRSN FSKAFKQYFN LCPGDIAPQ
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