| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2999 |
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| Symbol | |
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| ID | 3967760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3823238 |
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| End bp | 3824452 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637922096 |
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| Product | response regulator receiver/GGDEF/EAL domain-containing protein |
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| Protein accession | YP_528468 |
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| Protein GI | 90022641 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000288968 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATACAG TACTCTTTAA TTTTCACGAC CTTGTACTGA TTCTTACCGC CTTTGAATGC
CTGCTTTTCG CGCTATTACT AAGCGCAACC AATAAAGAAA AAGTCATAAG CACTTATTTT
TTTATAGGCT TTTTAATTTG TCATATATTT ATCCCTGTGC ACGAACTTAC CTTTTGGGGT
AAGCAATTTC GTATATGGAT GCTAGATATA TCGCCCAACT TATTCTTTGT GGGCAGCTAC
GCTTACTTCT TAGATGGGCC CTTGCTGTAC TTTTTTGTGC GCTCACTGCT GTATAAAGAT
TTTAAATTCA AGCAAATACA CCTATTACAC GCGCTGCCAG TCATACTGTT TTTTATTCAT
ATGGTGGTAT CGTTTTACTT GCAGGGCTAC GACGAACGGC ACCGCTTAAT AGAAACCCAG
CACATTGCTT ATTCATCCCC CTATTTATAC TTCGATGCCG CCGGTCGCTA TATGCGCGTG
GTGTATGCGG TGTTATGTTT TGTGCTTATA TTTAATTACG GCGAGCAACT TAAAAACGTA
TTTGCCAATT TAAATAAACG CGACCTTGCC TGGTTGAAAG TTATGCTAAC TAGCTTCTTA
GTATTATTTA GCTGGGATGC CTTACTGCTA ACTATAAAGC TACATGGCCT AGCCAACGAC
GACTTTAATA TGGACTTATT AAACGTATTC GGGCTAAGCG GCTATTACCT AACCTTCGCC
GTGTTAAACA TACTTATATT CTTGAAGTTC ACCCTGTTTA CTTCGGTAGC CTCGGTAAAC
GAAAGTGCAA CGCCAGAGCG CCATGACGAA AAATTAGAAG GCGTAGATAA AGCAGTCGTT
GACCATATAG AAAAAACGAT GGCAGAGTCT AAAATTTATA CAATGCCAGA TATCACGGTA
GATAGATTAG CAGCCGAAAT GAAGATGCCA GCCAAGCGGC TATCGCAAAC CATAAAACAG
CATTTTCACT TAAACTTTTA CGAGTTTATT AACAGCTACC GTATAGAAGA AGCCAAGCGC
TTACTTAGCG ACCCAGAAAG CGCCAATAAA ACCATTACCG AGATTTACTA CGAAGTTGGC
TTTAATAGTA AATCTGTGTT TAATACATTC TTTAAACGCG TTGTAGAGCT TACACCTAGC
CAGTATAGAG AGCAGCAAGC TAAGGCAAAT AACAGTGATA AGGCGGGGTT TGCGTTGGTT
CGGCGGGAAA AATAA
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| Protein sequence | MDTVLFNFHD LVLILTAFEC LLFALLLSAT NKEKVISTYF FIGFLICHIF IPVHELTFWG
KQFRIWMLDI SPNLFFVGSY AYFLDGPLLY FFVRSLLYKD FKFKQIHLLH ALPVILFFIH
MVVSFYLQGY DERHRLIETQ HIAYSSPYLY FDAAGRYMRV VYAVLCFVLI FNYGEQLKNV
FANLNKRDLA WLKVMLTSFL VLFSWDALLL TIKLHGLAND DFNMDLLNVF GLSGYYLTFA
VLNILIFLKF TLFTSVASVN ESATPERHDE KLEGVDKAVV DHIEKTMAES KIYTMPDITV
DRLAAEMKMP AKRLSQTIKQ HFHLNFYEFI NSYRIEEAKR LLSDPESANK TITEIYYEVG
FNSKSVFNTF FKRVVELTPS QYREQQAKAN NSDKAGFALV RREK
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