| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2987 |
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| Symbol | |
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| ID | 3967748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3795658 |
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| End bp | 3796737 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922084 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_528456 |
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| Protein GI | 90022629 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3021] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000379614 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGATAC TACTGAGTGT TTGTACGTTA ATTATTGTTT TAGCCACTGT GCTGCCGCTA
GTGAGAATCA CCCATTGGAG TGTGCGCGGG CTAGATTTTC CTAGGTTACA AATACTTTTT
TTGGCTTCGG CCTTAGCTAT CGCTCACCTC CTTTTTCCTA CCAGTGAATC TGTTGCTGCA
TTGGTTATGT TGGCCGCAAC GCTGATTTGT GTGGTAGTCC AGCTGTGTTG GGTGCTGCCT
TACACACCTT TTTGGCGCAA GGAAGTAAAA ATCGCGCCGT TAGCAAGCGG TAATAGCTCG
CTAAGTGTTA TCACTTCTAA TGTGCTTAAA ACCAATCGAA ACAGCGCGGC ACTTATTGCG
TTGGTTAAAG AATATAAGCC CGATATTCTC GTAACCTTAG AAACGGATGC GTGGTGGGAA
GAGCAGTTAA GCGTGCTGGA GCCTGCTATG CCTCATACGG TAAAGTGCCC GCTCGACAAC
CTGTACGGCA TGCACGTCTA TTCAAAATTA CCTTTTATTA AGCAAGAGTT AGCGTTTTTG
GTGGAAGAGG ATGTTCCATC TGTGCATGTG ACCGTTTCGC TCCAGTGCGG CAGCAAGGTA
AGGCTACATT GTTTGCACCC TGCGCCACCC AGCCCCACAG AAAATGCAGA GTCTACCGAG
CGCGATACTG AGTTGTTGGT TGTGGCAAAG CGCGTGGCGC AAACACAAGG GCCAATTGTT
GTAACGGGCG ATTTAAACGA TGTTGCTTGG TCTACAACTA CGCGTCTGTT TCGAAAAATT
AGTGGGTTAC TCGACCCGCG TGTTGGGCGT GGAATGTTTA ATACATTTCA TGCGGGCTAT
TTTTTTCTAA GGTGGCCGCT GGATCATTTA TTTCACAGCG AGCACTTTAC GTTAAAGAAA
ATGCAGCGGT TGCCTTCTAT CGGTTCCGAC CACTTTTCGC TTTATACCGA GCTAGTCTTT
TCCCCAAAGG CTGGTGCCGA TCAAGATGGT GTCGATTCGA CACAGGCCGA TAAAGAAAGG
GCTGGCGAAA TTGTGAATGC GGCAGAGGCT GAGGTGAGTG TCAGTGATGT TCCTAGCTAG
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| Protein sequence | MLILLSVCTL IIVLATVLPL VRITHWSVRG LDFPRLQILF LASALAIAHL LFPTSESVAA
LVMLAATLIC VVVQLCWVLP YTPFWRKEVK IAPLASGNSS LSVITSNVLK TNRNSAALIA
LVKEYKPDIL VTLETDAWWE EQLSVLEPAM PHTVKCPLDN LYGMHVYSKL PFIKQELAFL
VEEDVPSVHV TVSLQCGSKV RLHCLHPAPP SPTENAESTE RDTELLVVAK RVAQTQGPIV
VTGDLNDVAW STTTRLFRKI SGLLDPRVGR GMFNTFHAGY FFLRWPLDHL FHSEHFTLKK
MQRLPSIGSD HFSLYTELVF SPKAGADQDG VDSTQADKER AGEIVNAAEA EVSVSDVPS
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