Gene Sde_2969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2969 
Symbol 
ID3967808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3773331 
End bp3773681 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content50% 
IMG OID637922066 
Productputative formamidase regulatory protein FmdB 
Protein accessionYP_528438 
Protein GI90022611 
COG category 
COG ID 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.294396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTGT ATGACTATAA ATGTAAAGAG CATGGTGTAT TTAACGATTT GGCAACCATA 
GCCGATAGCG ATAAACCCTG TGCTTGCCCA ACCTGTGGTG AGCTAGCGGC CCGCATTATT
CGCCTGCCGC CCACAATTAC GAAAATGCCA AGCGCTAAAA AGCACGCTTA CGAAGTAAAC
GAGCGCAACC AGCATGAGCC GACGCATTCC ACCGCTGCGC GCCGGCAAGA TGATGAGCAG
CATGCGAAGG GCTGTGGCTG TCAGAAAAAA TTAAGTCATT CCAAGCTTAT GTATACCGCG
CAAGGGGAAA AAATGTTCCC GTCGATGCGC CCGTGGATGA TTAGCCACTA A
 
Protein sequence
MPVYDYKCKE HGVFNDLATI ADSDKPCACP TCGELAARII RLPPTITKMP SAKKHAYEVN 
ERNQHEPTHS TAARRQDDEQ HAKGCGCQKK LSHSKLMYTA QGEKMFPSMR PWMISH