Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2969 |
Symbol | |
ID | 3967808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3773331 |
End bp | 3773681 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637922066 |
Product | putative formamidase regulatory protein FmdB |
Protein accession | YP_528438 |
Protein GI | 90022611 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.294396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGTGT ATGACTATAA ATGTAAAGAG CATGGTGTAT TTAACGATTT GGCAACCATA GCCGATAGCG ATAAACCCTG TGCTTGCCCA ACCTGTGGTG AGCTAGCGGC CCGCATTATT CGCCTGCCGC CCACAATTAC GAAAATGCCA AGCGCTAAAA AGCACGCTTA CGAAGTAAAC GAGCGCAACC AGCATGAGCC GACGCATTCC ACCGCTGCGC GCCGGCAAGA TGATGAGCAG CATGCGAAGG GCTGTGGCTG TCAGAAAAAA TTAAGTCATT CCAAGCTTAT GTATACCGCG CAAGGGGAAA AAATGTTCCC GTCGATGCGC CCGTGGATGA TTAGCCACTA A
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Protein sequence | MPVYDYKCKE HGVFNDLATI ADSDKPCACP TCGELAARII RLPPTITKMP SAKKHAYEVN ERNQHEPTHS TAARRQDDEQ HAKGCGCQKK LSHSKLMYTA QGEKMFPSMR PWMISH
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