| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2960 |
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| Symbol | |
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| ID | 3967838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3760647 |
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| End bp | 3763505 |
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| Gene Length | 2859 bp |
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| Protein Length | 952 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922057 |
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| Product | cellulose binding, type IV |
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| Protein accession | YP_528429 |
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| Protein GI | 90022602 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCTC TAAAGCGAAC TTTGCCAATG TTAGTGGCGG TTATTGCTGT CGCATCGTGT
GGCGGAAATA ACCGTCAAAG CACGCTTGGC GATTTAGAGT ATAGGCCAAA GCAAGAGCAA
GAAATTGAGT TTGAAAAGCT CGATCATGCG CAAGTGCGTG AAGAATATAA AGAATTGCTC
GACTTGTTTG AAGATAAACA ACTAAAAGAG CAAATAGAAC GCCGTATTGC CGATGTGTAT
ATGATGGAAT CTGTGCACAC GCAACATCAA GATGTAGAAA AGAAAAGCTA TTATTTAGAA
GCTATTAAAG AATACGAAAA AATTCTAGAA AAGTACCCCA ATTCGCCAGA TAACGCGGAA
GTGCTTTATC AGTTAGCAAA AGCATACGAT ATGGAAGGTG AGCAGGAAAA AGCCTTACGT
ATGTTAACCG AACTTACATC TAAGCATCCT TACTACCCCA ATTTGGCTGA GGCGTGGTTC
CGTGTGGCGG ATATCCACTT TAGCAACCAG CGTTACGACC AAGCTAAACA CGCTTACCAA
CAAGTTACGC ACCTTAATAC TGGTACGCTT TGGGTAAACG CGCACTATAT GTTGGGCTGG
ACGCATTACA AACAGTTTCA ATATGAAAAA AGTTTAGATT CCTACGCAAA CGTATTGAAC
ACCTACCTCG CGGGCAAAGA GTCTGCTGAA GGGTTAGGTA AGGCCGAAAA GCCTGTGGTT
GAAGATACAT TGCACTCAAT AAGTTTATCG CTAGATAAAT TAGCCGGCGC CGAAACAATT
CCTAATGTAC CGGGTTTGGT TGGCCGCTCT TATGTTTGGA TGCTGTATAA AAAACTGGGT
GACTTTTACT TAGAAAAAGA ATTATTCGGC GAAGCGGTAA ATAGCTACCG CGCTTATATT
GATGCTAACC CTAGCTCGCA GCGTGCGCCC GTGTTTCACA ATATGGTTAT CAATGCGCAC
ATCAAAGGTG GTTTTCCTGC GCTGGCGTTA GAAGAGAAAG CGCTTTACGT AAAAGCTTAC
GGTATTCATT CGAATTTTAA CGTTGCAGAT GAATCCATTC GCGCTTCTAT TTCAACTTCA
TTACGTGAAT ATTTAGAAGA GCTGGCCAAA TTCCATCACA GCGCAGCACA GGATTACGAC
AAAAAACTGG CTGAACTCGA AGAGAAGCCC AAGGGGCAAG ATAAGCGTAT TAGTGTTGCG
CGCAAAGATG CCAAAGCGTC TTACGATTCC GCAGCGGCTT ACTACAAGGA ATTAGCAGAC
ACTTTCCCTA ATGACCCGAA CTTCGATTCA ACTATGTACT ACCGTGCAGA AGTGTTATTT
GCCGGTAAAC GATTCGCCGA AGCGGTACAT GATTACGAGT TCGTTGCTTA TACGCCCAAG
GGCAAAAGCG CAGAAGAGCA GCGGCCCGAT GCGGGTTACG CAGCGATTAT TTCGTATCAA
AAACACATAG ATACCTACCC AGAAGCCGAG CAAAATTCGA AAGCGGTTAG ACAGTGGCAA
GAAAAAGCTG TGGCTTCCAT GCTTAATTTT GCTGGCACCT TCCACGCGGA TGAGCGTTCA
CCTTCGGTAC TCACTAACGC AGCAGAATAC TTGTTTAGCT TAAATAAGTA TGAACAGGCC
ATTGAAGTGT CTACTGCGCT GCTGAATAAG AACCCAAACC TCGACAACAA TCTTAAGAAA
ACCGCTTACG GTATAGCGGC GCACTCTTGG TTTAAATTAG AAAACTATGT TGAGGCTGAA
GCGAGTTACT TGAATCAGCG AGCGCTGGTC GTCCAGGAAA GTGAAGAATA CAACGTTATA
TCTGAACGCT TAGCCACGAC TATCTACAAA AATTCCGAAA CAATAGTGCA AACAGGCGAC
AAGCAAGCCA CTATCGCCGA ACTATTAAAA ATCAAAGCGT TATCCCCAAA CTCTACACGT
CGTGTACCCG CGCAATACGA TGCTGTTATT TTATTGATGG AGTTAAAGCA GTGGGATACA
GCAATAGACG AGCTTCTAGA TTTAAAAGCT AACTTCAGTG AGCACGAGTT GGCTGTGGAA
TTCCCCAGAA AACTGGCATT AGCCTACGAG CGCGATGAAC GCTGGCAAGC GGCTTCGCAA
GAATACTTGG CGCTAAATGC AAACGACCCG GATGTGGAAG TGCAGCGCGA AGCCTTATTT
GCGGCGGCAA TGATGTTTGA AAAATCGGCA GAACATGAGA AAGCGATTAA ATACTTTAAG
CAGTATGCGC ACCGCTACGA ACAGCCTTTC GATACGCGAA TGGAAGCGCG CTACAGGCTT
GCGCTTAATT ACGAAACCTT AGGTGAAGCC GGCAAAATGC AATACTGGCT GCGTAGAGTG
ATAGAGGCTA ATAGAAAAGC TGGCGATAAT AAAACTGAGC GCAGTATTTG GTTGGCGGCC
TGGGCCAATA CTAAATACGG CGATTTCTAC GCAGAACAAT TCCATAACAC CAAGTTGACT
CAGCCTTTGG TAAAAAGCTT ACCTAAGCGC AACGCGTTTT TAGAGCAGGC TAGTGCGAGT
TATCAGCAAG CTGCCGAATC GGGCGTGCTG GAATACGTAA CACTTTCGGG TTATAAAATC
GCGAAGTTAT ATCAGGCATT AGCATCCGAT CTGCGAACTG CTCCGCCGCC TAGCAACCTA
AGTGGCAGCG ATATTCAACT GTATGAAAGT ATTATCGAAG AGCAAGCCCA GCCTCTTGAT
CAGTTGGCAA TAGAGTTACA TGAAGCCAAT GCTAGTCGGG CGTGGGATGG CGAGTTTAAC
GAGTGGATAG ATAAAAGTTT TGTGCAGTTA CGTGCTCTCT ACCCAGAGCG ATATGCAAAG
AGTGAGGTAT TAGTGAGTTA TGGCGATGAA ATACGTTAA
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| Protein sequence | MKPLKRTLPM LVAVIAVASC GGNNRQSTLG DLEYRPKQEQ EIEFEKLDHA QVREEYKELL
DLFEDKQLKE QIERRIADVY MMESVHTQHQ DVEKKSYYLE AIKEYEKILE KYPNSPDNAE
VLYQLAKAYD MEGEQEKALR MLTELTSKHP YYPNLAEAWF RVADIHFSNQ RYDQAKHAYQ
QVTHLNTGTL WVNAHYMLGW THYKQFQYEK SLDSYANVLN TYLAGKESAE GLGKAEKPVV
EDTLHSISLS LDKLAGAETI PNVPGLVGRS YVWMLYKKLG DFYLEKELFG EAVNSYRAYI
DANPSSQRAP VFHNMVINAH IKGGFPALAL EEKALYVKAY GIHSNFNVAD ESIRASISTS
LREYLEELAK FHHSAAQDYD KKLAELEEKP KGQDKRISVA RKDAKASYDS AAAYYKELAD
TFPNDPNFDS TMYYRAEVLF AGKRFAEAVH DYEFVAYTPK GKSAEEQRPD AGYAAIISYQ
KHIDTYPEAE QNSKAVRQWQ EKAVASMLNF AGTFHADERS PSVLTNAAEY LFSLNKYEQA
IEVSTALLNK NPNLDNNLKK TAYGIAAHSW FKLENYVEAE ASYLNQRALV VQESEEYNVI
SERLATTIYK NSETIVQTGD KQATIAELLK IKALSPNSTR RVPAQYDAVI LLMELKQWDT
AIDELLDLKA NFSEHELAVE FPRKLALAYE RDERWQAASQ EYLALNANDP DVEVQREALF
AAAMMFEKSA EHEKAIKYFK QYAHRYEQPF DTRMEARYRL ALNYETLGEA GKMQYWLRRV
IEANRKAGDN KTERSIWLAA WANTKYGDFY AEQFHNTKLT QPLVKSLPKR NAFLEQASAS
YQQAAESGVL EYVTLSGYKI AKLYQALASD LRTAPPPSNL SGSDIQLYES IIEEQAQPLD
QLAIELHEAN ASRAWDGEFN EWIDKSFVQL RALYPERYAK SEVLVSYGDE IR
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