Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2921 |
Symbol | |
ID | 3968050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3704961 |
End bp | 3705698 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637922018 |
Product | hypothetical protein |
Protein accession | YP_528390 |
Protein GI | 90022563 |
COG category | [S] Function unknown |
COG ID | [COG3148] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCACA ACCCATTTTT CGCCCTCTAC GAACAGCGCC TAGCCATCGC CACACGCGAG TTTAACGCAC GGGGTAAATC CCTTATTCGT TGCCCGCGCT GCTGGCTTGC TGAGAATACC TGTATCTGTG CGTGGCGGCC CTGCTCTACC AGTAATATTG AATTTGTTTT ACTGATGCAC TCAGACGAAA TATTCAAACC CACCAATACA GGGCGCCTAA TTGCCGATTT ACTACCCCAG CAAACCCATG CCTATTGCTG GCATAGGAAA TCCCCAAGCC CAGACCTACT GCAACTGTTA AACGATCCGA ATCGCCGCTG CTTGTTGTTA TTCCCCGTCA ATGACCACGA TTTGGCAGAA CGTCCACGCG AGGTATACCA CCACCTACCC AGCGACGATA AAATAAACAC CCTCGTTTTA CTCGACGGCA CCTGGAAGCA GAGTGCGCGT ATGTTTCATT TAAGCCGCTG GCTTGATAAA CACGCCAGCC TTACCCTGCC CGAAGGTTTG GTTAAAAGCT ATAGCGTACG CAAATCCGAC CGGGCCGAGC GCCTTTCTAC CGCCGAGGCT GCTGGGTTGT GCCTTGCCCT GGCAAAGGAG CAACACAACG CGGATTTACT TACCGATTAC TTTGATGTGT TTAATCAACA CTACCTCGCC ACCCGCGGCT GCTACACCCC AATGCAAAGT GAAGCCCATA TACGTCTTAG CGAACACATA GCAAAACAAG CCTACTAA
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Protein sequence | MSHNPFFALY EQRLAIATRE FNARGKSLIR CPRCWLAENT CICAWRPCST SNIEFVLLMH SDEIFKPTNT GRLIADLLPQ QTHAYCWHRK SPSPDLLQLL NDPNRRCLLL FPVNDHDLAE RPREVYHHLP SDDKINTLVL LDGTWKQSAR MFHLSRWLDK HASLTLPEGL VKSYSVRKSD RAERLSTAEA AGLCLALAKE QHNADLLTDY FDVFNQHYLA TRGCYTPMQS EAHIRLSEHI AKQAY
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