Gene Sde_2921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2921 
Symbol 
ID3968050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3704961 
End bp3705698 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content51% 
IMG OID637922018 
Producthypothetical protein 
Protein accessionYP_528390 
Protein GI90022563 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCACA ACCCATTTTT CGCCCTCTAC GAACAGCGCC TAGCCATCGC CACACGCGAG 
TTTAACGCAC GGGGTAAATC CCTTATTCGT TGCCCGCGCT GCTGGCTTGC TGAGAATACC
TGTATCTGTG CGTGGCGGCC CTGCTCTACC AGTAATATTG AATTTGTTTT ACTGATGCAC
TCAGACGAAA TATTCAAACC CACCAATACA GGGCGCCTAA TTGCCGATTT ACTACCCCAG
CAAACCCATG CCTATTGCTG GCATAGGAAA TCCCCAAGCC CAGACCTACT GCAACTGTTA
AACGATCCGA ATCGCCGCTG CTTGTTGTTA TTCCCCGTCA ATGACCACGA TTTGGCAGAA
CGTCCACGCG AGGTATACCA CCACCTACCC AGCGACGATA AAATAAACAC CCTCGTTTTA
CTCGACGGCA CCTGGAAGCA GAGTGCGCGT ATGTTTCATT TAAGCCGCTG GCTTGATAAA
CACGCCAGCC TTACCCTGCC CGAAGGTTTG GTTAAAAGCT ATAGCGTACG CAAATCCGAC
CGGGCCGAGC GCCTTTCTAC CGCCGAGGCT GCTGGGTTGT GCCTTGCCCT GGCAAAGGAG
CAACACAACG CGGATTTACT TACCGATTAC TTTGATGTGT TTAATCAACA CTACCTCGCC
ACCCGCGGCT GCTACACCCC AATGCAAAGT GAAGCCCATA TACGTCTTAG CGAACACATA
GCAAAACAAG CCTACTAA
 
Protein sequence
MSHNPFFALY EQRLAIATRE FNARGKSLIR CPRCWLAENT CICAWRPCST SNIEFVLLMH 
SDEIFKPTNT GRLIADLLPQ QTHAYCWHRK SPSPDLLQLL NDPNRRCLLL FPVNDHDLAE
RPREVYHHLP SDDKINTLVL LDGTWKQSAR MFHLSRWLDK HASLTLPEGL VKSYSVRKSD
RAERLSTAEA AGLCLALAKE QHNADLLTDY FDVFNQHYLA TRGCYTPMQS EAHIRLSEHI
AKQAY