Gene Sde_2917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2917 
Symbol 
ID3968046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand+ 
Start bp3700631 
End bp3701374 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content49% 
IMG OID637922014 
Producthypothetical protein 
Protein accessionYP_528386 
Protein GI90022559 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.862692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTT TTGATTTACC CGCCTCCGCA TGGCTTTTAC TCACTTCCGC TGCATTTTTA 
ATTGGTATGG CTAAGACAGG TGTACATGGT GCCGGCATGG CTGCAGTACC GCTTTTAGCA 
CTGGCATTTG GCGGCAAAGC ATCGTCGGGC ATCGCCCTGC CCATGCTAAT CATGGCTGAC 
ATATTTGCTG TGGCCTACTA CCACCGCCAC GCCAACTGGG GGTTGCTGTT AAAGCTTTTC 
CCTTGGGCCG CAGGCGGTGT AATTATTGGT ACCGCCATGG GTACATTTAT TGACGACCAG 
CAGTTCCGCT TTTTAATGGG CATTATTATT TTTATAAGCC TAGGCATTAT GCTGTGGATG 
GAGCGCGGCA ATAAAGAGCG CGTGCCAAAC TCTTTGGCAT TTACCGCCTC GATGGGTTTG 
CTGGGCGGCT TTACTACTAT GGTGGGTAAT TTAGCAGGCC CAGTAATGGC TCTGTACCTG 
CTTAGCTCTC GCCTGCCCAA AAATGAATAT ATTGGCACCG CTGCTTGGTT TTTTATGGTG 
GTAAATGTAT TTAAGGTGCC ATTCCACATT TGGGGCTGGC ACACCATTAC CACAGAGTCG 
TTTTTGCTTA ACCTCTCTAC CCTACCGCTA ATTGCTGTTG GGGCCCTGTG CGGCATATGG 
ATAGTTAAGC GTATTGCCGA GCGGTTTTAT CGCATATTTG TTATTGCCAC TACCGCTGTG 
GCGGCAGTGC TTATGGTTTT ATAG
 
Protein sequence
MTIFDLPASA WLLLTSAAFL IGMAKTGVHG AGMAAVPLLA LAFGGKASSG IALPMLIMAD 
IFAVAYYHRH ANWGLLLKLF PWAAGGVIIG TAMGTFIDDQ QFRFLMGIII FISLGIMLWM 
ERGNKERVPN SLAFTASMGL LGGFTTMVGN LAGPVMALYL LSSRLPKNEY IGTAAWFFMV 
VNVFKVPFHI WGWHTITTES FLLNLSTLPL IAVGALCGIW IVKRIAERFY RIFVIATTAV 
AAVLMVL