| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2900 |
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| Symbol | |
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| ID | 3968068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3676928 |
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| End bp | 3678988 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921997 |
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| Product | ferrienterochelin/colicin outer membrane receptor |
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| Protein accession | YP_528369 |
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| Protein GI | 90022542 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.12655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAGAC AAATACTAGC GTCGCGTTTT AAGGTGCTTA CTTTAGCAAT AGGTATTGCA
CTGGCGAACG AAGGTTATGC CAAACAAGAA GAAGCTCACG ATTCTTCCTT GCTAAGCATG
AGCCTTGCAC AGTTACTTGA TATAGAAGTA ACAGGGCCAA CACGCGACGA GCAAACCTTC
AGGCTGGCGC CTGCAGCGGT ATCGGTTTTT ACCCATACCG AAATCGCAGC TATGGGGTTA
GCTACTCTCG ATCAGCTAGT TAATTTCGCG CCTGGCTATC AATCTAATCG CAATGGCGGC
AGCCCAATTT ACGCTCCCTA CACATCTCGC GCCCGTCGCA TAAGCGGGTC AAGCTCTGAA
ATATTATTAT TGGTAGATGG CCAACGTATT AATGACCCGC GTACAAGTGG CGCGTCGAGT
ATTGTGCCTC AGTTCCCACT GGCTAATATT GAGCGCATTG AGTTTATTCG AGGGCCAGGT
TCTGCCCTGT ATGGCTCCAA TGCCATGCAA GGCGTTATTA ATATTGTTAC CCTCTCGAAT
CAAAACCGAG CCTCTTTGGA AGTGGGTAGT TTTGACCACA CAGCGCTTAA CTTTTTTAAT
TCACAGCAAG TTGCACATAT CCAAATAGAC AGCTTTCTGG ATATACAACA GGATGGCGGC
GACAATTACA ACATTCCTTC TAGCACCTCG CCCGATGGAA CTGTAGCCAC ACAGGACCCG
AAAAGTCGGT TGAGCCTTAA TATAAAAGCG CAAAAAAATA ATACCCAGCT TAAACTCCAA
CACTACGCTG CAGAAGCTGA AGACTTTTAC CTAAATGGCG GCATTGCCAA CGGCGTAAAC
AAACACAAAA GCGAACTAAG CGCATTGGAA CTAGTGCAAA CTTTTCGTTT AGACAACAGC
TCGTCAATGA TAAGTGCAAA TTACACGCGC TCGAGCACAC TAAGAATTCA ACAGTTACTG
CCCGCTGGTA GCATGAGGGA CATGAGCACT CCATCTAGCG ATGCACCGTT TACAGGCGGC
ACTAAAGATA ATGTGTATAG CGAATATGAA TTGCAGTGGA CAAATAACTG GCAATTAAAC
AGTGCCAATA AACTGCAGTT TGGAGCAAGC TACCGCCATA TAGACTCTCC AGAATTACAG
GTGACCACCA ACTACGATAT AAAAGCGTTT ATTGCGCGCG AGTTTCCCAT TACCTACTAC
GGCAAACAAA CCGACGGCCC GCCAGCACAG CATGCATCCA CGCGGGATAT TCTAGGTGTT
TACTTACAAC ATCAAACCAC CGTTGCCGAC AAGCTACACA TCACCCTCGG TGCTCGCCAC
GATGAGTTTT CGAACATAGG CAATAGGCTT AGCCCACGCT TAGCGTTGGT GTACACGCCA
ACAGACGCCA ACACGTTTAA ATACTTGTAC GCCGAAGCCT ACCGAGCGCC CTCAGAAGCC
GAGCTAAATT TAACCGATAA CCCACAGTTT TTAGGCAACC CAAACTTACA ACCCGAGGTG
GTAACAACAT CCGAAATAAT TTGGATATTT CAATGTGAAA AATACAGCCT AACCAGCGGT
ATTTTCGAAC ATCAATTTAC AAACGCAATA GTGCAGCAAA GCATTGGTGA GCGCACCCAG
CAGAACTTCA ACATGGACCA AAGCCCTGTG CGCGGCGCAG AGCTCGAACT AGCGCTACAG
GCAACACCTA AACTTTTTGT GCGCGCCAAC ACCACCGCGA TTTGGGATAA ACCAGAAACC
TCTTACCGCG AAGCTAGCCG TCTGGCTTCT TTAATGGTGA GCTACCAGCA CCAACAATGG
AATGCGAATG TAGGCGCCTA CTGGCACGGC GAAACGGAAA TGGCCACCAA CGGCGACGAC
TCGCAGCGCA CCCAAGTAGA TGCATTCACA CTTGCAACAG CCAAATTAAG TAGAGCCATT
AATTCACAGT TAAATGTTTA CCTTAAGGCC TACAATGTAT TTGATAGCAA CATAGCTACC
GCCCCAGAAA GTTCAAGCTT GCAACAAGGT ATCCCCAATA GAGGTCGTAG CATACAACTC
GGGTTTACCT ACCACTTTTA A
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| Protein sequence | MIRQILASRF KVLTLAIGIA LANEGYAKQE EAHDSSLLSM SLAQLLDIEV TGPTRDEQTF
RLAPAAVSVF THTEIAAMGL ATLDQLVNFA PGYQSNRNGG SPIYAPYTSR ARRISGSSSE
ILLLVDGQRI NDPRTSGASS IVPQFPLANI ERIEFIRGPG SALYGSNAMQ GVINIVTLSN
QNRASLEVGS FDHTALNFFN SQQVAHIQID SFLDIQQDGG DNYNIPSSTS PDGTVATQDP
KSRLSLNIKA QKNNTQLKLQ HYAAEAEDFY LNGGIANGVN KHKSELSALE LVQTFRLDNS
SSMISANYTR SSTLRIQQLL PAGSMRDMST PSSDAPFTGG TKDNVYSEYE LQWTNNWQLN
SANKLQFGAS YRHIDSPELQ VTTNYDIKAF IAREFPITYY GKQTDGPPAQ HASTRDILGV
YLQHQTTVAD KLHITLGARH DEFSNIGNRL SPRLALVYTP TDANTFKYLY AEAYRAPSEA
ELNLTDNPQF LGNPNLQPEV VTTSEIIWIF QCEKYSLTSG IFEHQFTNAI VQQSIGERTQ
QNFNMDQSPV RGAELELALQ ATPKLFVRAN TTAIWDKPET SYREASRLAS LMVSYQHQQW
NANVGAYWHG ETEMATNGDD SQRTQVDAFT LATAKLSRAI NSQLNVYLKA YNVFDSNIAT
APESSSLQQG IPNRGRSIQL GFTYHF
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