| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2876 |
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| Symbol | |
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| ID | 3968102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3643480 |
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| End bp | 3644049 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921973 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_528345 |
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| Protein GI | 90022518 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
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| TIGRFAM ID | [TIGR03645] lactoylglutathione lyase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0039397 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATAATTT TACCTAATCA AAGTCCCCCT GTAACCTTTT CTTTATTAGT CAAACAGGAG
ACCTTAGCCA TGAGTAACAC TTACCCAAGA TCGTTTTCAC ATATAGGCAT ATCGGTGCCC
AACCTTGAAC AAGCCGTGCA GTTTTACACC GAAGTGATGG GTTGGTACCT AATCATGCAG
CCCATAGACA TCACAGAGGA CACGAGTGCC ATTGGCGAAA TGTGTACTGA TGTATTCGGC
GAAGGCTGGG GAAGTTTCAA AATTGCGCAC CTATCTACAG GGGACCGCAT TGGCGTGGAA
CTTTTTCAGT TCCCAAATCA AACCAACCCC GAAAACAATT TTGAATATTG GAAAACCGGA
ATCTTTCACT TTTGCGTGCA AGACCCAAAT GTAGAAGAGC TTGCAGAGCG TATTGTGGCG
GCAGGGGGCA AAAAACGCAT GGCCAAGCCG CGCTACTATT ACCCAGGCAA AAAGCCTTAC
CGCATGATTT ATATGGAAGA CCCTTTCGGC AACATTTTAG AAATATATAG CCATAGCTAC
GAGTTGATAT ACAGCGAAGG GGCGTACTAG
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| Protein sequence | MIILPNQSPP VTFSLLVKQE TLAMSNTYPR SFSHIGISVP NLEQAVQFYT EVMGWYLIMQ
PIDITEDTSA IGEMCTDVFG EGWGSFKIAH LSTGDRIGVE LFQFPNQTNP ENNFEYWKTG
IFHFCVQDPN VEELAERIVA AGGKKRMAKP RYYYPGKKPY RMIYMEDPFG NILEIYSHSY
ELIYSEGAY
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