Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2842 |
Symbol | |
ID | 3968186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3591589 |
End bp | 3592542 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637921939 |
Product | ATP-binding protein of ABC transporter |
Protein accession | YP_528311 |
Protein GI | 90022484 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0000492349 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.269335 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGATG TTACCCAGTT AACTCGACGC TATGGCGATT TCAAAGCGGT AGATAACGTA AGCTTTACTA TTAAAACTGG CGAGATTGTT GGTTTGCTCG GCCATAACGG CGCAGGTAAA ACAACAATCA TGAAAATGAT AAGCGGTTAC CTAGAGCCCT CTAATGGCTC GGTAAGCTTA GATGATGTTT CGCTAGAGGA CGACGCGAAA CTTGTGCAGC AGGGGCTTGG TTACCTACCA GAAAGCCTAC CCGTATACCC CGAAATGAGC GTGGCAGATT ACTTAAACTA CGCTGCAGGT TTAAAAGGGC TAGAGGGTGA AATAAAAAAC GCGGAGATAA AACGCGTTAT ACAAGCTACC GATATATCTG AAAAATTACT TGCTCCCATA GCGACGTTAT CGCGCGGTTA CAAGCAGCGG GTGGGGGTGG CGCAGGCCAT TCTCGGTAAG CCCAAGTTGC TAATTCTAGA TGAACCAACT AATGGTTTAG ACCCCGAGCA AACCTTGCTA ATGCGCAAAC TTATTAAAGA TATCGCGCAG GATGCAACCG TTATTCTTTC TACCCATATT ATGCAAGAGG TAGAAGCTAT CTGTTCGCGT GTACTTATGT TGCGTGCAGG GCAGCTGGCT GTGGATGAAT TACTCGAAAA TCTAAAACGC AGTAACTCAT TACTGCTACA TACGTCGTTG CCTTCCGATC AATCTACGTT GCTTACCCAG CTTACGGGGA TAGCGAGTGT GTCTGCATTA CCCAGCGAAA GCAGCAATGC CATTTACTGC ATAGAAATAG AAAAAAATGC CGAGCTAGAT AGCGTGGCCG CGTTAGTGGC CGAAACCATT GTGCAAGCAA AGCACAAGCT CATTCAATTA AAACCCGAAA TACGTGACCT AGAATCGCTA TTTAAAGAAG TTAATCAAAC GAGTTCGTTA GGAGGTATAA GCCATGCAGC CTAA
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Protein sequence | MLDVTQLTRR YGDFKAVDNV SFTIKTGEIV GLLGHNGAGK TTIMKMISGY LEPSNGSVSL DDVSLEDDAK LVQQGLGYLP ESLPVYPEMS VADYLNYAAG LKGLEGEIKN AEIKRVIQAT DISEKLLAPI ATLSRGYKQR VGVAQAILGK PKLLILDEPT NGLDPEQTLL MRKLIKDIAQ DATVILSTHI MQEVEAICSR VLMLRAGQLA VDELLENLKR SNSLLLHTSL PSDQSTLLTQ LTGIASVSAL PSESSNAIYC IEIEKNAELD SVAALVAETI VQAKHKLIQL KPEIRDLESL FKEVNQTSSL GGISHAA
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