| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2809 |
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| Symbol | |
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| ID | 3968288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3544131 |
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| End bp | 3546500 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921906 |
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| Product | ATPase |
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| Protein accession | YP_528278 |
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| Protein GI | 90022451 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.153749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000401461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCGCAGTC TAGCCCCCAT AAAAATAAGA GAGAAAATAA GAGAGACACT CATGTTTAAT
ATACGCGCTT GGCAACTTGA CTTGCCCTTG GCGTTATTGG CGTTTTCGTC TACAAGTTAC
GCTATCGATA ACGGCACTTA CACAATTCAA TCTAAACACA GTGGCAAGGT TGTAGAAGTG
GCCGCAGGCA GTGTAGATGA TGCTGCAAAT GTGGCCCAAT GGCCCAGTAA TGGCCATCCT
ACCCAGCAGT GGATAATTAC CCAAATTAGC GGCGATGATT ACTCGGTAAT AAATGTAAAT
AGCGGCAAAG CTATGGAGGT ATACGACTTC GGCACCACGG ACGGCGGCAA CATAGTGCAA
TACCCCTACT GGGGAGGCGC CCCCCAGTTG TGGACAATTA CAGATCAAGG CGGTTATTAC
AGCTTAATAA ACAAACACAG TGGTAAAGCT TTAGATTTGT TAAATTGGGA TACCACAGAC
GGCGCCAATA TAGGCCAGTG GGCTTGGTGG GGCGGCGATG CGCAACTGTG GGCACTGAAC
ACAGTGCAAC CCAGCACAGT CACCTTCACA CTTGAAGAAA ACCAAGCGGG TTTTTGCAGC
GTAGATGGCA GCATAGATAG CAATCATACG GGCTATACCG GCAGCGGGTT TGCCAATACA
ACCAATGCAA ATGGCCAAGG AGTTAATTGG TCGGTAAATG TAGCCACAGC TGGTACCTAT
ACGTTTACAT GGCGCTATGC GGGCACTAGC AACCGCCCAG CCAACTTGCT AATAGATGGC
AGCACACAGG TTTCGGGCAT TGCTTTAAAT TCAACCGGCG CATGGGCAAC TTGGGCTAAT
AGTGCAGAAA TAAGTGTTTG GCTTGACACA GGTGTGCACT CACTTCGGCT GCAAGCCACA
ACCAGCGCGG GCTTACCTAA TATAGATTCG CTTAGCATAA CCGGCCAAAG CGCAGCAGCG
GGCAACTGCA GCGGCGCAAT TGAACCTATC ACTTTTGCCA CACCAAGCTT TACCAATATA
GCGGTGCACG ACCCCTCGGT AATAGAAGCA AACCATCAAT ACTACGTATT TGGCTCCCAC
CTTTCTGTGG CTAAAACGCC CGACCTAAAA AACTGGTCGC GCGTGGCGGA TGGTGTAACC
ACCAATAACC CATTGTTTAA CGATGTAACC AGCGAACTTG CAGAAGCATT AGCTTGGGCA
GAAACCACTA CCCTGTGGGC GCCAGATGTT ACCTATGTAA ATGGTCGGTA TTTGATGTAT
TACAACGCCT GCCGTGGCGA CTCACCACTG TCGGCTATGG GTATTGCTTC TTCGAACAAC
ATAGAAGGCC CTTACACTAA CGATGGTATA TTCCTTAAAT CTGGAATGTG GGGCCAAACC
AGCGAAGATG GCACTGTGTA CGACGCAACC GTGCACCCCA ATGCTGTGGA CCCCGTTATT
TTTAGCGACG CAAATAATCG CATGTGGATG ACCTACGGTT CGTATTCGGG TGGTATTTTT
ATTATGGAGT TAAACCCATC CACGGGGTTC CCTTACGCGG GGCAAGGTTA TGGTAAACAT
TTAATGGGTG GCAACCACGC GCGCATTGAA GGCGCTTACA CCATCTACAG CCCAGAAACG
GGCTACTACT ATATGTATGT AAGCTACGGT GGCCTAGGCG CAGATGGCGG CTATAACGTT
CGTGTGGCCC GAGCAACTAG CCCAGACGGC CCCTACTATG ATGCCAACGG CACCAATATG
GCCAACGTAA AAAGCAACCC AAGCTTGCCA CTGTTCGACG ACGCCAGCAT AGCACCCCAC
GGTGTAAAAC TTATGGGTAA CCACGTGTTT AGCGGCACTA ACAATGTACT TGGTTACGTA
TCACCAGGGC ACAACTCTGC ATACCGTGAC GCCACTACCG GCCAAACATT TTTACTATTC
CACACACGCT TCCCTGGGCG CGGCGAAGAG CATGAAGTGC GAGTGCATGA AGTGTTCTAC
AACGATGCAG GCTGGCCGGT AATAGCACCA TTGCGCTATG CCCAAAAAGT AGATGCCAAC
AACCCAAATA GAAGTGCGAG CGAGCTAAAT GCAGTGTACG CAAGCGAACT GCCAGGTAGC
TATCAGCTAA TTAACCACGG CAAAGACATA AGCGCGACAA TTAAAAATTC CGTTAACATC
ACGCTAAACA GCAACGGCAG TATCTCTGGC GAGCTATCTG GCAGCTGGAC ATACAACGCC
AACACCCGCA ATACCGTAAT CACCGTTGCC GGTGTGGCCT ACCGCGGCGT GGTATCTCGC
CAATGGAACC AAGCACGCAA CCGCTTCGAA GTCACCTTCA GCGCCCTATC TGCAGACGGC
ACAGCAATAT GGGGGGTGAA CAGCGACTAA
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| Protein sequence | MRSLAPIKIR EKIRETLMFN IRAWQLDLPL ALLAFSSTSY AIDNGTYTIQ SKHSGKVVEV
AAGSVDDAAN VAQWPSNGHP TQQWIITQIS GDDYSVINVN SGKAMEVYDF GTTDGGNIVQ
YPYWGGAPQL WTITDQGGYY SLINKHSGKA LDLLNWDTTD GANIGQWAWW GGDAQLWALN
TVQPSTVTFT LEENQAGFCS VDGSIDSNHT GYTGSGFANT TNANGQGVNW SVNVATAGTY
TFTWRYAGTS NRPANLLIDG STQVSGIALN STGAWATWAN SAEISVWLDT GVHSLRLQAT
TSAGLPNIDS LSITGQSAAA GNCSGAIEPI TFATPSFTNI AVHDPSVIEA NHQYYVFGSH
LSVAKTPDLK NWSRVADGVT TNNPLFNDVT SELAEALAWA ETTTLWAPDV TYVNGRYLMY
YNACRGDSPL SAMGIASSNN IEGPYTNDGI FLKSGMWGQT SEDGTVYDAT VHPNAVDPVI
FSDANNRMWM TYGSYSGGIF IMELNPSTGF PYAGQGYGKH LMGGNHARIE GAYTIYSPET
GYYYMYVSYG GLGADGGYNV RVARATSPDG PYYDANGTNM ANVKSNPSLP LFDDASIAPH
GVKLMGNHVF SGTNNVLGYV SPGHNSAYRD ATTGQTFLLF HTRFPGRGEE HEVRVHEVFY
NDAGWPVIAP LRYAQKVDAN NPNRSASELN AVYASELPGS YQLINHGKDI SATIKNSVNI
TLNSNGSISG ELSGSWTYNA NTRNTVITVA GVAYRGVVSR QWNQARNRFE VTFSALSADG
TAIWGVNSD
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