| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2774 |
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| Symbol | |
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| ID | 3968331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3506253 |
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| End bp | 3507149 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637921874 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_528246 |
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| Protein GI | 90022419 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00446959 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTACCG ACAAATTCGT TGCCATGAAG ATCTTCCGAC GGGTGGCGGA GCTGAAAAGT
TTCACGCTGG CGGCGGATGA TCTGGACACC ACGCCGGCCA CGGTCAGCAA ACATATTGCT
TTTCTCGAGC GCGATCTGGG TACCCGCTTG ATTCACCGGA CCACGCGTCG GCTGAATCTG
AGTGATGCCG GACTGACGTT CCTGAAACGC ACGCAAGAAC TATTGGATGC ACTTGAAGAA
GCCGAGCTTG AAGCACAGGG CTATCAGACA AGCCCTAAAG GGTCGATTCG ACTAAATGTA
CCGATGTCTT TCGGGTTGAC TCACCTCACC GAGGCTGTCG ACAGTTTTTT GCGCCGCTAT
CCGGATATCG ACATTGATCT GCAGTTCAGT GATCGTCTGG TCGATCTGGT AGAACAAGGC
GTGGATCTTG CCATACGGGT GCGTCACTCG CTCGCTGATT CCAGCTTGCA GGCCCGTGCG
CTGAAACAGT CCCGCAACGT CGTGTGCGCT GCCCCGTCCT ACCTTGCCCA GAATCCTGAG
ATCAGGTGCC CGGATGATCT GGTCCATCAC AATTGTTTGC TGTACACCCT GCACGACCGC
CCCAAAGTCT GGGAACTGGG CAATCAGGAA GTGATCGTGG GAGGCAATTT CAGAACCGAC
AGCAGTCTGG CGATCCGGGA GTGCCTGATT GCTGGCGCAG GAATCGGTTT CATCCCGCGC
TTTCTGGTCG AAAACGATCT TGAAAACCAG AAACTGGTAC CCCTGCTGAC CGATTTTCCC
GCCAAACCGT ACACGGTGTT TGCCTTGTTT CCCCCCGGAC GCAAACAGCC AGCGAAGGTT
CGCCTGCTGG TGGCACACCT CGAAGAGCAC CTGAATCAGA AGTCGTTCTG GGAATAA
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| Protein sequence | MATDKFVAMK IFRRVAELKS FTLAADDLDT TPATVSKHIA FLERDLGTRL IHRTTRRLNL
SDAGLTFLKR TQELLDALEE AELEAQGYQT SPKGSIRLNV PMSFGLTHLT EAVDSFLRRY
PDIDIDLQFS DRLVDLVEQG VDLAIRVRHS LADSSLQARA LKQSRNVVCA APSYLAQNPE
IRCPDDLVHH NCLLYTLHDR PKVWELGNQE VIVGGNFRTD SSLAIRECLI AGAGIGFIPR
FLVENDLENQ KLVPLLTDFP AKPYTVFALF PPGRKQPAKV RLLVAHLEEH LNQKSFWE
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