Gene Sde_2757 details

Gene Information

• Locus tag: Sde_2757
• ID: 3968353
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Saccharophagus degradans 2-40
• Kingdom: Bacteria
• Replicon accession: NC_007912
• Strand: -
• Start bp: 3492242
• End bp: 3495679
• Gene Length: 3438 bp
• Protein Length: 1145 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637921857
• Product: hypothetical protein
• Protein accession: YP_528229
• Protein GI: 90022402

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.636677
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 7
• Fosmid unclonability p-value: 0.0057166
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGATTAACC AGGATATTTA TTTAACCAGC CCATCTAGCC GTAAATTGGT TAACGAAGGT 
GTTGCCAGCG TTAATGATGA TAAAACCCAA GAAGCACTGA ATGTGCTCAG GTACGAACTG 
GAAACCTTCG TCTGCGATGG CCAGTACGAA AAAGGCATCG AAGATATTTT AGATACCTAC 
CTTAAGAATG TTGATCAAGC CCAGCAGCCA GCGGTTTGGA TCAGCGGCTT CTATGGTTCG 
GGTAAATCGC ACCTGGTTAA AATGCTACGC GCCTTATGGA CGGATATGAC CTTCCCCGAT 
GGCGCCAGTT CGCGCGGCAT TGCCAAGCTG CCGCAAAACG TCAAAGACCT ATTGTCCGAG 
CTTACTACCC AGGGCAAACG CCACGGTGGT TTGCACGCCG CCTCGGGTAC CTTGGGCGCT 
GGTGCCAGCG GCAGTGTTCG GTTGGCGCTG CTGCGCATTG TGTTTAAGTC GGTGGGGCTG 
CCAGAGCAAT ATCCCGTTGC CCGTTTCGTT ATGTGGCTCA AGTCGGAAGG CATCTACGAG 
CAAGTCCAAC AGCACGTCGA GAACAATGGC CACGATTGGA ATGAAGAGCT TGATAACTTC 
TACGTTGCAG AAGGCTTACA TGAGGCTCTG TGTGTGGTAA AGCCCAACCT GTTCTCGTCA 
CCGGTTTCCT GTGTGGAAAC TCTGAACAAC CTGTACCCCT ATGTGCAGGA TGTCAGCTCC 
GATGACATGA TCAAAACCAT CAAGGCGGCC TTGTCGAACA ATGGCAAGTT TCCGCTGACA 
CTCATCGTGC TCGACGAGGT TCAGCAGTAC ATCGGTGAAG ACAGCCAGCG CTCCATCGAT 
GTGCAAGAAG CGGTAGAAGC TTGCTGTAAA AACATTGGCG GCAAACTGCT GTTTATCGGT 
ACCGGTCAAA CCGCTGTAAC GGGTACATCT AACCTCAAAA AACTGGAAGG CCGTTTTACC 
GTCCGTATTG AGCTTTCGGA TGCCGATGTG GACGCGGTTA TCCGCCAGGT GATCTTGGCG 
AAAAAGGCGG AATCGCTACC CAAAATTGAA CAGACCTTGC AGCAAAACCT GGGCGAGATT 
TCCCGCCACT TAGCAGAGTC CAAAATTGGT CATCGACAGG ATGACATTCA GTTCTTCGCC 
CAAGACTATC CCATCCTGCC GGTACGCCGC CGCTTCTGGG AAAACACCCT GCGTGTACTC 
GACCAAACCG GTACCGACAG CCAACTACGT AACCAGCTGA GCATGATCCA CAAGTGCATC 
CAATCTAACC TGGATAAACC GCTGGGCAGT GTGATCCCTG CTGATTACCT CTACTTCGAC 
GGGGCCGATA AGCTCCTGCA ATCACGTGTG CTGCCGCGCA AAGTACACGA AAAAACCTTC 
AGCTGGATGA AAGGCAACGA CGAGCAGAAA CTCTTAGCCC GAGCCTGTGG CCTCGCCTTT 
TTGGTTGGTA AACTGCAATC CGAGAACAAA GAGATCGGCA TCAAAGCCAA CCTGGAAACC 
CTGGCTGACT TGATGGTTGA GGATTTAAAC CAAAGCAGTT CGGCACTGCG CACTAAACTG 
GCGGGCCTGT TGGATAACTG CGAATTGCTG ATGAAAGTCG GCGATGAATA CCGCATTCAA 
ACAGAGGAAA GCCAAGCCTG GAACGATGCT TACTTGCGTC ACCGCAATAC CCTTGCCAAC 
GAAGCGCACC GTTTGGAGAC CGAACGTACC GACCGCATCC GTAAAAAGTT CGCCGAGCGG 
GTGAAGAAGT TTTCTGTTAA CCATGGGCAG TCCAACGTGC CGCGAGCCTT GTCAGCACTG 
TTTGATGCCT CACTGCCCGC CGATGCCGAT AGCAAAATCT ATGTGTGGGT GCGTGACGGT 
TGGAGTATCG ACGAAAACTC GGTGCGTGTG GATGCCCGCC AGGCCGGCAA TACAGCTTCC 
ACTATTTATG TGCATATCCC CAAGCGCTCG GCAGACGACC TGCGTCATCA CCTGATCGAC 
CTCAAGGCCG CCATCGCCAC CTTAGAAGAA AAAGGCTCGC CCGATACCCC AGAAGGCAAG 
GAAGCCCGAG CCGCCATGCA AACGGCTCAG GCAATGGCCG AATCCAAGGT GAATGACCTG 
CTAGCTGACA TCCTCGATGG TGTCCGTGTC TTCCAGGCCG GCGGTAATGA AGTGCTGGGC 
AACGACCTGC AAGAGATGAT TTTAGAAGCG GCTGAGAATT CGCTCACCCG CCTGTATCCG 
CAATTCCATG TCGCTGACCA CACCGGTTGG AGCAAGGTTT ACGACAAAGC CAAAGCCGGT 
GCTTCAGACG CGCTGAAAGC CGTAGGTGAC GACGGTGAAC CCGCCAAGAA CCCCGTGTGT 
AAAGCCGTGA TTAACTTCTT GGCCGGTGGC AAAAAAGGCG CCGATATTCG TACACAATTT 
GAAGGTGCGC CCTACGGTTG GCCAGGTGAC GCCGTGGATG GTGCTTTGCA AGTATTGGTG 
GTGGCAGGTG TGGTGCGTGC CCAAACCGAT CGCGGCCAGA ACATTGAGCC GCGCGAGCTG 
GAGCGTAAAA AAATTGGCCT GAGTTTTTTT AAATTAGAAA CTGCCGTAGT CACCACGCCG 
CAGCGCATCC AAATCCGCAA ATTGCTGCAG CAAGTGGGCT GCCAAGCCAA ACAAAATGAA 
GAGCTGGCGG TATTGCCAGA GTTTCTACAA AAACTGAGTC AGCTGGCGGA AAACGCTGGT 
GGCGATGCGC CACGCCCTGC CAAGCCCAAC ACTAGCCACC TGGACGATAT TCGTCGTGCA 
GCCGGTAATG AGCAGCTACT CGCCATTTAC AACCTGCGCG ATGAACTCAA GCAGCAAATT 
GATGATTGGC AGGCATTGAG TGCCAGCATT CAACAACGCC TACCGGCCTG GCAAAGCCTG 
CAAGTCTTCG CTAACCACGC CAAATCACTC GATGGCGCCG AGGTGCTGCA AACCCAGGTT 
GATCAAATTA AAGAACAACG TTTATTGCTG GCCGAGCCCG ACCTCATGGC GCCACTCATG 
GCCAGCTACA CCCAGTTACT GCGCGATGAG CTAAACACCC TGCAACAGGC CTATGACGAC 
GCCCATGCCA AAGGCATGCA GCGCCTGAAC GAAGACAGCA ACTGGCAGCA GCTGGAACAA 
GAGCAAAAGC ACCAGTTCTT GGCCGAGCAA AAGCTCACCG CAACCGACAA GCCCGAAATC 
GCCGTCGGCT CTAGCGACGA TATTCAAAAG ACGCTGCAAC GCATCAGCAT TGGCATGCTG 
GCTGAACGCA TTGCCGCCAT GCCAAGCCGC TTTGATGCCA TCTCTATCAA AGCCGCCGAA 
GAGATGGAGC CGAAAGCGCA GTTTATTCGC ACTCCACGCC GCACCCTGAA AACCGAGGCC 
GAAATCACCG CCTGGTTAGA CGAGGTAGAA CAGCAACTCA AAACCGCCTT GGCCGAAGGG 
CCAATCGTGT TGCAATAA 

 

Protein sequence

MINQDIYLTS PSSRKLVNEG VASVNDDKTQ EALNVLRYEL ETFVCDGQYE KGIEDILDTY 
LKNVDQAQQP AVWISGFYGS GKSHLVKMLR ALWTDMTFPD GASSRGIAKL PQNVKDLLSE 
LTTQGKRHGG LHAASGTLGA GASGSVRLAL LRIVFKSVGL PEQYPVARFV MWLKSEGIYE 
QVQQHVENNG HDWNEELDNF YVAEGLHEAL CVVKPNLFSS PVSCVETLNN LYPYVQDVSS 
DDMIKTIKAA LSNNGKFPLT LIVLDEVQQY IGEDSQRSID VQEAVEACCK NIGGKLLFIG 
TGQTAVTGTS NLKKLEGRFT VRIELSDADV DAVIRQVILA KKAESLPKIE QTLQQNLGEI 
SRHLAESKIG HRQDDIQFFA QDYPILPVRR RFWENTLRVL DQTGTDSQLR NQLSMIHKCI 
QSNLDKPLGS VIPADYLYFD GADKLLQSRV LPRKVHEKTF SWMKGNDEQK LLARACGLAF 
LVGKLQSENK EIGIKANLET LADLMVEDLN QSSSALRTKL AGLLDNCELL MKVGDEYRIQ 
TEESQAWNDA YLRHRNTLAN EAHRLETERT DRIRKKFAER VKKFSVNHGQ SNVPRALSAL 
FDASLPADAD SKIYVWVRDG WSIDENSVRV DARQAGNTAS TIYVHIPKRS ADDLRHHLID 
LKAAIATLEE KGSPDTPEGK EARAAMQTAQ AMAESKVNDL LADILDGVRV FQAGGNEVLG 
NDLQEMILEA AENSLTRLYP QFHVADHTGW SKVYDKAKAG ASDALKAVGD DGEPAKNPVC 
KAVINFLAGG KKGADIRTQF EGAPYGWPGD AVDGALQVLV VAGVVRAQTD RGQNIEPREL 
ERKKIGLSFF KLETAVVTTP QRIQIRKLLQ QVGCQAKQNE ELAVLPEFLQ KLSQLAENAG 
GDAPRPAKPN TSHLDDIRRA AGNEQLLAIY NLRDELKQQI DDWQALSASI QQRLPAWQSL 
QVFANHAKSL DGAEVLQTQV DQIKEQRLLL AEPDLMAPLM ASYTQLLRDE LNTLQQAYDD 
AHAKGMQRLN EDSNWQQLEQ EQKHQFLAEQ KLTATDKPEI AVGSSDDIQK TLQRISIGML 
AERIAAMPSR FDAISIKAAE EMEPKAQFIR TPRRTLKTEA EITAWLDEVE QQLKTALAEG 
PIVLQ