Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2752 |
Symbol | |
ID | 3968348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3482579 |
End bp | 3484627 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637921852 |
Product | putative ATP-dependent Lon protease |
Protein accession | YP_528224 |
Protein GI | 90022397 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4930] Predicted ATP-dependent Lon-type protease |
TIGRFAM ID | [TIGR02653] conserved hypothetical protein [TIGR02688] conserved hypothetical protein TIGR02688 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTAG ACCAACTCGA TCAAATTGCC GCTGCGCATT TGGAAGGTTA CTTAGTTCGT AAAGATTTGG TGAGAACCTT TGCTCGGCAA TTTCCTGTGC CTACCTATGT GGTTGAGTTT TTGCTGGGCC GATATTGTGC CAGTACCGAC CCGGATGAAA TTGAGGAAGG GTTGGAGATT GTTCAACGTC AATTGGAGTC GCGCACGGTC AGGGCTGGTG AAGAAGAGCT GTTTAAAGCC AGAGCCTATA AGAACGGTAC GGTAAAGCTG ATCGATTTGG TTAGCGCTCG ATTCAGTCAA AAAGACAATG GTTATGTGGC TACTTTGCCC AGCGTACAGC TTAATCGAGT GCGTATTAAT GATAACGTCG TAGACGATAA TGAGCGACTG TTAACGGGTG GATTTTATGC CGAAATCACC TTGGAATATG ACTCACTGAT CGCCGAAGAA AAAGGCGATG CCTTCGGTAT TAAAGACTTA CGGCCCATTC AGCTTTCTAA GCGGGATGTA CTGGATGATT TAGCTGAAGC AAGAAAGCAG TTTACCAGCC AGCAATGGAA GGATTTCCTT TTGCGTAGCA CTGGTCTTGA AGCAAACGTT TTGAGCGACC GCGCGAAGGA TGCCAACTTA TTGCGTATGG TTCCGTTTGT AGAGCGCAAC TATAACCTGG TAGAGCTTGG GCCACGTGGT ACTGGCAAGA GCCATCTCTT CCAGCAGGTT TCCCCCTATG CACATTTAAT TTCCGGCGGT AAAGCGACCA TCGCCAAGAT GTTCGTGAAT AACGCTTCGG GCGCCCGCGG CTTGGTGTGC CAATACGATG TGGTTTGTTT TGATGAAGTA AGCGGTATTT CCTTCGATTC CAAAGAAGGG ATCAACATCA TGAAGGGCTA CATGGAGTCT GGTGAGTTCT CTCGTGGTAA AGAGAGTATT CGCGCAGATG GCTCAATGGT GTTTGTTGGC AACTTCGATG TGGATGTAGA GCATCAGCAG CGCGTTGGCC ATTTGTTTGG ACCGCTGCCA CAAGAAATGC GGGACGATAC CGCTTGGATG GATCGCATCC ATTGTTATCT GCCCGGCTGG GATGTGCCCA AAATGCACAA AGAACTCACG ACCGATCATT TTGGTTTGGT TAGTGATTTT TTCTCTGAGT GTTTAAGCCG CTTGAGATTC CAGAGCCGAG TTAGCGTACT GCAAAATCGT GTTCATTTTG GCGGTGCGCT AAGTGGTCGT GATGTTAATG CCGTGAACAA AACCGTTTCT GGCCTGCTAA AGCTGATGTA CCCGTCTCAG GATATGGAGA TCAGCGACGA AGATCTTGAG TGGGCGGTAA GGCTCGGTCT GGAAGTTCGT CGTCGCGTCA AAGAGCAGCA GAAGCGCGTG GGTGCCGCAG AGTTCCGTAA CACCCACTTT AGCTACTTCC TGGGTGATGA CGGTGTTGAG AAGTTTGTCG CCACGCCTGA GCTGCGATCC GATAACGAAA TTGGCGATGA TCCATTAGAA CCAGGCCAGA TTTGGACGGT CAGCGAGGGT GGTCAGGACA TTGACGACAA CCCTGGCTTG TACCGCATCG AGGTTAATGA AGGCCCTGGC TCTGGTGTCA AAATCCTCAA CAACCCGGTT CCGCCAGCAT TCAGGGAGTC TGTCCGTTAC GCTGAACAAA ACCTCTATTC TCGATCTATG CAGCTGGTAG GTGATCGCGA CCCCAGAGCG CATGAGTTCA CGATACAGCT CCGGGCATTT GACGCTTCTA AAAAGGGATC GAAGCTCGGC ATAGCCTCTC TCGTCGCTAT GTGCAGCAGC TTGCTCAAGA AACCGGTGAA AGGCGGCCTG ATCGTCGTAG GAGAAATAAA CCTGGGGGGC TCGATTGAAC CGATACACAG TGCTGTGAAT ATTGCTGAAC TGGCGGTTGA AAAAGGCGCG TCGTCATTGT TGATGCCAGT GACCTGTCGC AGGCAGCTAT ATGACCTCTC GGATGATATG GCCACCAAGA TCGATATACA GTTCTACCAA GATGCAAGGG ATGCGCTGTT GAAGGCGATT GTGGAATAA
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Protein sequence | MELDQLDQIA AAHLEGYLVR KDLVRTFARQ FPVPTYVVEF LLGRYCASTD PDEIEEGLEI VQRQLESRTV RAGEEELFKA RAYKNGTVKL IDLVSARFSQ KDNGYVATLP SVQLNRVRIN DNVVDDNERL LTGGFYAEIT LEYDSLIAEE KGDAFGIKDL RPIQLSKRDV LDDLAEARKQ FTSQQWKDFL LRSTGLEANV LSDRAKDANL LRMVPFVERN YNLVELGPRG TGKSHLFQQV SPYAHLISGG KATIAKMFVN NASGARGLVC QYDVVCFDEV SGISFDSKEG INIMKGYMES GEFSRGKESI RADGSMVFVG NFDVDVEHQQ RVGHLFGPLP QEMRDDTAWM DRIHCYLPGW DVPKMHKELT TDHFGLVSDF FSECLSRLRF QSRVSVLQNR VHFGGALSGR DVNAVNKTVS GLLKLMYPSQ DMEISDEDLE WAVRLGLEVR RRVKEQQKRV GAAEFRNTHF SYFLGDDGVE KFVATPELRS DNEIGDDPLE PGQIWTVSEG GQDIDDNPGL YRIEVNEGPG SGVKILNNPV PPAFRESVRY AEQNLYSRSM QLVGDRDPRA HEFTIQLRAF DASKKGSKLG IASLVAMCSS LLKKPVKGGL IVVGEINLGG SIEPIHSAVN IAELAVEKGA SSLLMPVTCR RQLYDLSDDM ATKIDIQFYQ DARDALLKAI VE
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