Gene Sde_2718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2718 
SymbolglmM 
ID3968407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3445133 
End bp3446473 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content49% 
IMG OID637921818 
Productphosphoglucosamine mutase 
Protein accessionYP_528190 
Protein GI90022363 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID[TIGR01455] phosphoglucosamine mutase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.286925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGGA AATATTTTGG TACCGACGGT ATTCGTGGGT TGGTGGGAGA GGGTGTTATT 
ACTCCTCAGT TCTTCCTGCA ATTGGGGTGG GCTGTGGGCA AGGTGCTCGC TCAGCAAAAT
GGCGATAAAA GTGGCGGTTT GGTATTGATT GGTAAAGATA CCCGTATTTC TGGCTACATG
TTTGAATCAG CATTAGAGGC CGGCTTAATA AGTGCGGGTG TAGATGTAGG CTTGTTGGGC
CCCATGCCTA CGCCGGCAAT TGCTTATTTG ACGCGTACCT TTCAGGCCAG TGCCGGCATC
GTAATTAGCG CTTCTCATAA CCCGTACACC GATAACGGCA TTAAGCTATT TAATACCGAC
GGCACCAAAT TGCCAGATGA CGTGGAGTTG GCTATTGAAG ACCAGTTAGA TCGCGCTATG
ACCACCGCGT CTAAATTGGG TAAGGCGCGC CGAATTGCCG ATGCCGAAGG TCGCTATATC
GAGTTCTGTA AGGGTTCTTT GCCCTGGGGC TTTAACTTGC GCGGCCTGAA TATAGTAGTG
GATTGCGCCA ACGGTGCCAC TTACGAGGTT GCCCCCAAAG TATTTGGCGA GCTTGGTGCC
AATGTAATTC CTATTGCGAA TAAGCCAGAT GGCCTCAATA TTAATTTAGA TTGTGGCTCT
ACTAAGCTCA ACCAGCTGCA AAAGCACGTA TTAGAAACCG GTGCAGATAT GGGCATTGCC
TTCGATGGCG ATGGCGACCG CGTTATGTTT GTAGATGAAA AAGGCGAGGT GCTCGACGGC
GATCAGCTCT TGTTTATTAT CGCGTCGCAC AAGCATAAAA ACGGCGGTTG TTCCGGTGTT
GTTGGTACCT TAATGAGTAA TTTCGGCTTT GAGTTAGGCC TTAAAAACCA AGGTATTCCG
TTTGAGCGCG CTAAAGTTGG CGACCGCTAT GTTATTGAGG CGATGAAAAA TAACGGCTGG
CAGGTTGGCG GCGAGTCATC TGGTCATATT GTGTGCTCAG ATGTTACTAC CACCGGTGAC
GGTATTATTG CTGCGCTGCA AGTGCTGTTG GCCTTGAAGG CAGAAAAGCA GTCGTTGCAC
CAGCTTAAGT TGCGCATGCA AAAAATGCCG CAAGTTATGA TTAACGTGCG GGTCACCAAT
AAGGTAGACC TTGATAGCCA CGAGCAGGTG CAGGCGGCTA TAGCCAGCGC AGAAAAACGT
TTGGATGGAA AAGGGCGTGT TTTATTGCGT GCATCGGGTA CCGAGCCAGT TATACGGGTG
ATGGTGGAAG GGCAAGAGCA CCAGCTGGTA GCTTCTTTAG CTCAAGAATT AGCCGATATA
GTGGGCGAAG CAGTAGCTTA A
 
Protein sequence
MARKYFGTDG IRGLVGEGVI TPQFFLQLGW AVGKVLAQQN GDKSGGLVLI GKDTRISGYM 
FESALEAGLI SAGVDVGLLG PMPTPAIAYL TRTFQASAGI VISASHNPYT DNGIKLFNTD
GTKLPDDVEL AIEDQLDRAM TTASKLGKAR RIADAEGRYI EFCKGSLPWG FNLRGLNIVV
DCANGATYEV APKVFGELGA NVIPIANKPD GLNINLDCGS TKLNQLQKHV LETGADMGIA
FDGDGDRVMF VDEKGEVLDG DQLLFIIASH KHKNGGCSGV VGTLMSNFGF ELGLKNQGIP
FERAKVGDRY VIEAMKNNGW QVGGESSGHI VCSDVTTTGD GIIAALQVLL ALKAEKQSLH
QLKLRMQKMP QVMINVRVTN KVDLDSHEQV QAAIASAEKR LDGKGRVLLR ASGTEPVIRV
MVEGQEHQLV ASLAQELADI VGEAVA