| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2690 |
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| Symbol | |
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| ID | 3968470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3414540 |
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| End bp | 3415103 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637921788 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_528162 |
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| Protein GI | 90022335 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000000151344 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0026415 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTCGCA TAAATTTACT TCCTTGGCGT GAAGAGTATC GCCAAGAGAA AAAGAAAGAG
TTTTTCACGC AGCTGGTGGG GGTATGTATT CTCGCTGGCT TGGTTGCGTA TGTTTGGATA
GCAAGTGTTG ATAATGCTAT TGCTTATCAG AATGAGCGAA ACAATATACT GAATAACGAA
ATTAAAATGC TTTCTGAGCA GGTAAAGGAA ATTCAAGAGC TTAAAAAGAA GCGCAGAGAA
TTATCTGATC GGATGAAGGT TATTCAAGAC CTGCAAGGCA CTAGGCCGCT TATTGTTCGC
TATTTTGATG AGTTTGCTAA AGCTGTGCCA GATGGGATTT ATGTTACATC GCTCAAGCGA
GTTGGGAATG CTCTCACTAT CGATGGTGTA AGCGAGTCAA ATAGTCGTGT GTCAGCATTT
ATGAGGAAGT TAAACGCTTC TAAATATTTT GATGAGCCAG ATTTGAAAAC TGTTGATGCA
GTTCCTGAGC TGGGAGAGCA AGCGGCAAAA TTCACAATCC ATTTGAAAAT GGTGCTGCCA
GGCGATGGGG AGGCTCAGGG CTAA
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| Protein sequence | MARINLLPWR EEYRQEKKKE FFTQLVGVCI LAGLVAYVWI ASVDNAIAYQ NERNNILNNE
IKMLSEQVKE IQELKKKRRE LSDRMKVIQD LQGTRPLIVR YFDEFAKAVP DGIYVTSLKR
VGNALTIDGV SESNSRVSAF MRKLNASKYF DEPDLKTVDA VPELGEQAAK FTIHLKMVLP
GDGEAQG
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