| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2684 |
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| Symbol | |
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| ID | 3968464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3407909 |
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| End bp | 3409393 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637921782 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_528156 |
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| Protein GI | 90022329 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3266] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.882617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.208617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAGG AGGATATATT TGCGAGTACC GAGCGCAGTG GCGATGGTTT GCCTTATTAT
TACTCAACCC CAGCACGCAA TGGGCTGCTG CAGCAGGTTA TACACTTCAT TCGTTTTGGG
GAAGGTTTGC CTATTGTGCA GGGGCGATCG GGGGCGGGTA AATCCACCCT GTCGCTTCAG
TTGGTCTCCT TGTTACAGCC AGAAGCTAAT GTCGTTCAAA TAAGCGCGGC TGCTTTCTCT
GAAGATTTCA CGTCGTTGCT GGCAGAGGTA GCGGGTGATT TTGGTTTGCC AGTTGAGGGT
GGAGCTTCTT CGGGGGAGCT GCTGGTCGCT TTGCGTCATT TTACCCGTGC GCTAGCTGAT
GATAAGCGGC TAGGGGTGCT AGTTGTTGAT GATGCGCAAG AGCTTGATGA TCAGTCTCTC
GGAGGGCTGA TAAGTTTATT GCAGGGGCAG CAAATAGGGG GGAGCGGTTT TCATTTGGTT
CTTTTCGCAA GCGAAGACTT TGTTTCTAGA GTTGACGCTC TCGGTTTGTT GGATGTTCCT
GTTTACGATT TCGATGTGCC TTCGTTTTCA CCCACAGAAT TGTCAGGCTT TTTGAGAGGG
GTGAGTGGTC GCGAGATTTC TTCTGAGGGG GTCCAGTCGC TTTGGAATGC ATCCAAAGGA
GTGCCCGGTG TGGCGCTAAG TTTACTTAAT GCGCAGTCAC AGCACGGGCT GGATGAAGAG
GTTGAAGCTG GTCGTGCGGG TGGTTTTGCT GGTGGGCTGC CCGTAGCCCA TTTGGTCGCG
TTTTCAGTGC TACTGGGGGT CTTAATTTGG GTGTTCTTCG CAGGCGATGA CGGAGACCAA
AAAGCTGAAT CAAGCACTTC GCAAAGGGTT GAGAAATCGA TTCCTCTGCC TCCTGTAGAG
GTAAAAGAAG CTGTTGCGAA AGAGCCAAAG GTCGAGCCTG AGCGCTCTGA AGGTGAGAGA
GTGGTGCTTG ATACTCTCCC TGAGGGGGTG GTGGAGAGTG TCGAAAACGA TGTGGCACCG
GTCGATGAAG TGAGTGTAAG TAGCGCTCCT TCTGAGATCG TTCAAAAGGA GGTAATTAGT
GGGGGCGATC AACCGGCTGC AAAAGTTGTA AATGAGCCTA AGCCTACTGC ACCGCAAAAA
GCACCAGTAC CGCAAGTTAG TGGTGATGAG CGCGTTATAG AAGAGCACGA GCGCTATTTG
CTTGCACAAA ACGGAGACGC CTACACGCTG CAAGTGCTTG CTGCGAGCAA AAAGGAGGCG
TTACTGCAGT TTGTGCGTAG GCAGCCCAAT AGTGCTAATT TGCGTATCTA TCAGGGAATT
CGCGAAGGGC GGCAGTTGTA CGTGGTGATT ATTGGCGTGT ATTCTTCCAA GGAGGAGGCG
TTATCCGCCA TTGCCGACTT ACCACTAACG CAGCGACAGA GCGGGCCTTG GCCTAGGCAG
CTCAAGACTA TTCAGGCTGA TATCCGCGAA AATAGACGAA AATAA
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| Protein sequence | MDQEDIFAST ERSGDGLPYY YSTPARNGLL QQVIHFIRFG EGLPIVQGRS GAGKSTLSLQ
LVSLLQPEAN VVQISAAAFS EDFTSLLAEV AGDFGLPVEG GASSGELLVA LRHFTRALAD
DKRLGVLVVD DAQELDDQSL GGLISLLQGQ QIGGSGFHLV LFASEDFVSR VDALGLLDVP
VYDFDVPSFS PTELSGFLRG VSGREISSEG VQSLWNASKG VPGVALSLLN AQSQHGLDEE
VEAGRAGGFA GGLPVAHLVA FSVLLGVLIW VFFAGDDGDQ KAESSTSQRV EKSIPLPPVE
VKEAVAKEPK VEPERSEGER VVLDTLPEGV VESVENDVAP VDEVSVSSAP SEIVQKEVIS
GGDQPAAKVV NEPKPTAPQK APVPQVSGDE RVIEEHERYL LAQNGDAYTL QVLAASKKEA
LLQFVRRQPN SANLRIYQGI REGRQLYVVI IGVYSSKEEA LSAIADLPLT QRQSGPWPRQ
LKTIQADIRE NRRK
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