| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2675 |
|---|
| Symbol | |
|---|
| ID | 3968494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 3393854 |
|---|
| End bp | 3395089 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637921773 |
|---|
| Product | initiation factor 2 |
|---|
| Protein accession | YP_528147 |
|---|
| Protein GI | 90022320 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTAATT ATTGGCAGTT CTTACAGCAG GGCTGGCCCT TGCTCGTTTT TGGTTTTCTC
GCCGTTTTCT TTGGCAATTT TGGCCAATCT TTTTTTATTA GTTGGTACGG CGCTGCAATT
CAGGCGGATC TTAACTTAAG TGCATCAACC TACGGTGCAG CTTATTCCTT TGCAACCTTG
GTGTCGGGTT CGGCATTAAT GTTTGTAGGC GGCTGGATTG ATAAATGGTC GCTGCGGCGA
TTTGCCAGTA CCGTGGCTTT GGGGCTTTTT GTTGGCTGTT TAACGCTCGC GTTTACGCAC
AATATTGTTT TGTTGGTGAT TGGTTTTTTT CTTGTGCGTT TATTCGGACA GGGTTTGTTC
CCCCATACGG GTATAACCAC AATGGCGCGC AGCTTCGATA AAAACCGAGG TAAGGCGCTA
AGTATTGCAA CAATGGGTGT GCCTGTGGGC GAGGTAATAC TGCCTATTTT AGCAGTGTTG
TTTATAGCTA AATTCGGTTG GCAAATGAGC TGGGCGGCAT TCGCGTTACT TATTCCCGTT
GTGTTTATTC CTTGTATGCT GTTTGTTGTG CGCCGGGCAC ACCAGCTTGG TTTGCAGGTA
GACTCAGAGA TAAAAGCGCA AAGTTTAGAA GCGAGCGTAA AAGACCAACC AGCTACCCAA
GCTGTGGGGC GCAAGCAGGT ACTAAGGGAT TATCGTTTTT GGTTGGCTTT GCCGGTAATG
CTCTCTGGTC CATTTGTGGT AACTGGGGTG TTTATTCATC AAGGTTTTAT TCTTGCACAA
AAACAGTGGA GCCCCGAATG GTTTGCCGCG TGCTTTATTT TTTATGGTGT TGTGCACGGT
TTAGGTTCAA TGGGGGTGGG CTTTTTAATT GATCGCTTTA GCGCAACTCG ATTACTGCCA
TTCAAAGCGC TGCCAATTGT ATTCGCCTTG CTGTTACTTG CTTTCGCTAA TGGGCCTTGG
GTGGCTTGGG CAATGCTTGG TTTACTTGGC GTTTCAATTG GTTGCGGTGG CCCAATAGGT
GCCGCTTTGT GGGCCGAGGT TTACGGCACC GAGAAGCTAG GCGCAATTCG TTCTATGACG
AGTTCGTTCG CAGTTTGGTC TACAGCGGTT AGTCCTATTT TATTTGGCGT GTTAATTGAT
AACGGTATGA GTATTCAGGC GCTTATGTCT GGTGTGGCGG TTTATGTGTC TGCCGCAACG
CTTATGGGGT ATATGGCCTA TCGCGTAAAA AAGTAA
|
|---|
| Protein sequence | MRNYWQFLQQ GWPLLVFGFL AVFFGNFGQS FFISWYGAAI QADLNLSAST YGAAYSFATL
VSGSALMFVG GWIDKWSLRR FASTVALGLF VGCLTLAFTH NIVLLVIGFF LVRLFGQGLF
PHTGITTMAR SFDKNRGKAL SIATMGVPVG EVILPILAVL FIAKFGWQMS WAAFALLIPV
VFIPCMLFVV RRAHQLGLQV DSEIKAQSLE ASVKDQPATQ AVGRKQVLRD YRFWLALPVM
LSGPFVVTGV FIHQGFILAQ KQWSPEWFAA CFIFYGVVHG LGSMGVGFLI DRFSATRLLP
FKALPIVFAL LLLAFANGPW VAWAMLGLLG VSIGCGGPIG AALWAEVYGT EKLGAIRSMT
SSFAVWSTAV SPILFGVLID NGMSIQALMS GVAVYVSAAT LMGYMAYRVK K
|
|---|
| |