Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2651 |
Symbol | |
ID | 3968509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3354871 |
End bp | 3357129 |
Gene Length | 2259 bp |
Protein Length | 752 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637921749 |
Product | ATPase |
Protein accession | YP_528123 |
Protein GI | 90022296 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000453711 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.013056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA CGTTAGTCTC AACAGCCTGT TTTTGTTTCA CACTAGGTTA TTTAACACTA GTTAGTTGTA CCGCAAAAAA GCAACCTTTA ACGGTTACCC CCCCTGCTAA CGCTTCCCCC GCAGTAAGCA TAAGCACCAA TAAAAATATG CACACAGCAA GGTTCACACT CAACCAAGCA CGCAATATTC GTTTAGATAT AACACTTATA AGCCAGGCTC ACAGCGAGCG AATAAGCATT ACCAATCACG CACAAATACT TGTAGATAAC CTAGATATTC CCAATACTGG CGACAATACA ATTAGCGCAC ATTTAGGTTT GTTGCCTGCA GGCGAGCACA CTCTCAATAT TTTCTCGCAT CACGCCAATG TAAAAATAAC TGCAATCACT GCAACCAACT ATGCGCATAC CCAACCAGTT TCATTCAAAG ATATTACTCA AGCTGTTGAG CTCACCACTA ACGCAACATG GAAATACGGT GGCCCCTCTA TTGCAGACAT AAATAACGAT GGCTACTACG ATTTTTTATT AAGCAACCAC CACGAAGACC TGCCGCAATT ATTCATAAAC AAGGCGGGAG AAAAGGTAGA GCAACAAGCA CTGCCACTGC AACAAGGTGA CTTTCACGGC ACTACGCTGG CCGATTACAA TCGCGATGGG TTGCTAGATA TTTTAGTAGC CCGCGGCGGT GGCAATGGCA CACAGCCAAC ACCACCTATT TTATTGCGCA ATGAAAACGG CAGTTTTAAC AATGTTACCA ATCAAGAAGG CCTCGCCAAT ATCGGCGCGC GCGGGCGCTC TGTGCGCTGG CTAGATATGG ATTTAGACGG CGATTTAGAT ATGCTGCTTC TGAATGCGCG CAAATTAGAA AACGAAACTG CACCGCGCAA TATAGTATTA GAAAACACAC TTATTAGCGC CACCAACACA GCCGAGCACA ACACATTTAT TTATCGCGCT AGCAAGGTGT TTGAATCTGT AGAGGCAGAA CGTGTATTGG TGACAGATTT TAACAACGAT GATATTCCCG ATTTAATCAC CTACACACCG CTTACCTTTT TAAAAGGTAA CGGTGACTTT ACGTTTACCG ATGTAAGCCA ACAATTACTG CCCGCCCACC TAATTAACGC CCCCCATATA ACCGGCGTAA CAGAGTTAGA TATAAACAAC GACGGCAAAC GGGACTACTA TTTCGCGCGC GGAATGGTGT ATTACGAAAT GGCCAATCAT TCGTTAGAGT TTAGCCCTGC GCGCAATCGC ATAGACCTAC GTGAAGCTGG CAGCAAAGGT AGCGGCCATA TAGATTTCGA AGCCACAGGC GATGTTACAC TGCAAGACTT CTTCCATTGG TTTCGCGGCT ACAAGGGCGA GTTTCCACTG TATTTAGGCG AACAAAAGCA TCCCACCACC CCGCCAGAAA CGCATGCAGT GCACTTCACT CCCAACCTTT GCGCTGGCTG GCCCAGCAAC TTAGACGCGA ATGGTTGGTA CCTCGGCTAC CTAGGCAACA ACCAATGGCG CTTTGGCTGG CAGCTAGATG GCAATTTATT TTGGGGCTTA CGCGCCTCAA TAATTGGGGC TACAAATATG ACTCCCACCA AGCCCCCGCA AAATAACAAT GTACAAGACC TACTTTTGCT TAGTACCGCA AACGGCTACC AAGAAATTGG GGCGCAGGCA GGCATACCCA GTGGCGGTAA TCACCAAGGC GTAACAAGTG GAGACTTCAA TAATGATGGC TACGAGGATC TATTCGTCTA TCGCTTTGGC TTATTACATG GTCGCGTAGC TGACTGGCTG TTGCTAAACA CAGGCGACAA CCGTTTTATA AGCACTACCC GCCACGGCGC TACCAGCTCT GACGATAATG GCCACGGCGA TATGGGCCAA GCATTTGATT TTGATTTAGA TGGCCGCTTA GACCTGCTTA GCGGCAGTGA CAACCCTGGG CGCTGGTACC TTTACCAAAA TACGTCACCT ACAGCCAACT ACCTGCTTTT ACGTTTAGGA AATAGCCCTT CGGGCACCGA CCCCAGTGGT GCGCGGGTCA AAATAACCAC CCCAACCCGC ACCTACTACC GCACCGTAGG CTCTGCCGGG GAGATTCACT CGCAGAGCCT GTTAAACACC GTGCATGTAG GGTTAGGCGC CACACAGCAA GTAACAAGCA TTCACGTACG CTGGCGCGAC GGCACAGAAC AAACTCTGGG CCCACACGCT GCCAACCAAC GGCTTAGCGT TGGCTATACT CACCATTAG
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Protein sequence | MKKTLVSTAC FCFTLGYLTL VSCTAKKQPL TVTPPANASP AVSISTNKNM HTARFTLNQA RNIRLDITLI SQAHSERISI TNHAQILVDN LDIPNTGDNT ISAHLGLLPA GEHTLNIFSH HANVKITAIT ATNYAHTQPV SFKDITQAVE LTTNATWKYG GPSIADINND GYYDFLLSNH HEDLPQLFIN KAGEKVEQQA LPLQQGDFHG TTLADYNRDG LLDILVARGG GNGTQPTPPI LLRNENGSFN NVTNQEGLAN IGARGRSVRW LDMDLDGDLD MLLLNARKLE NETAPRNIVL ENTLISATNT AEHNTFIYRA SKVFESVEAE RVLVTDFNND DIPDLITYTP LTFLKGNGDF TFTDVSQQLL PAHLINAPHI TGVTELDINN DGKRDYYFAR GMVYYEMANH SLEFSPARNR IDLREAGSKG SGHIDFEATG DVTLQDFFHW FRGYKGEFPL YLGEQKHPTT PPETHAVHFT PNLCAGWPSN LDANGWYLGY LGNNQWRFGW QLDGNLFWGL RASIIGATNM TPTKPPQNNN VQDLLLLSTA NGYQEIGAQA GIPSGGNHQG VTSGDFNNDG YEDLFVYRFG LLHGRVADWL LLNTGDNRFI STTRHGATSS DDNGHGDMGQ AFDFDLDGRL DLLSGSDNPG RWYLYQNTSP TANYLLLRLG NSPSGTDPSG ARVKITTPTR TYYRTVGSAG EIHSQSLLNT VHVGLGATQQ VTSIHVRWRD GTEQTLGPHA ANQRLSVGYT HH
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