| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2649 |
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| Symbol | |
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| ID | 3968507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3350602 |
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| End bp | 3352212 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921747 |
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| Product | glutamate synthase, NADH/NADPH, small subunit 2 |
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| Protein accession | YP_528121 |
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| Protein GI | 90022294 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000123588 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0278702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGTAT CATCGCGTAC CGCATTTCAG TTTGCCGCCA TTGTTGCAAT GGGTGGGTTT
ATCTTTGGGC TAGATGCCGC GCTTATCTCC GGCACGGTGC GCTTTGTTAC TGCCGAGTTT
GGGTTGAATG ATTTGCAGTT GGGTTCAGTG GTTAGCGCAC CGGGTTTCGG TGTGTTGTTT
GCGCTAATTG CTGCGGGGCC TTTGTGCGAT CGAATTGGTA GAAAGTACAC TCTTATTATT
ATTGCTGCGC TCTATGTTTT ATCCGCGGTG TTTTCTGTAA TCGCCCCCAG TTACGAGGCA
CTTGTAGCGG CGCGCTTTAT TGGTGGTTTG GCCTTCGCCT CTCTCTCTTT GGCTTCTATG
TATATTGGAG AAATCGCACC AGCGGACATG CGTGGCAAGT TAGTTTCTAT GAACCAAATT
ACTATTGTGG TTGGGTTAAC GGCGGCTTAT TTCTTTAATT ATTTTTTATT GGAGCTTGCG
GGGTCGGGTG CCCAGTGGGT GCAAACCGTT GGCCTTCAGC AGAACCTTTG GCGCTGGATG
CTGGGCGTAG AAATTTTACC TGCACTTGTG TGGTTGTTGC TGCTGTTGCG CATTCCAGAA
AGCCCGCGTT GGTTGATAGC TAAAAATAGA ATTGACGATG CGAAGCACGC TTTGCAAAGG
TTGGTGCCGG CCGAGAAGGT GGAAGAAAAT TTAGCTTCTA TTTGCAATGC CGTGCATGGT
GAAGTGTTGG CCCCGTCTTT TGCTAAACAA TTTTCTATGT TGTTTGATTC TCGCTTAAAG
CGCGCAATGA TAGTTGGTTT GGCGTTTGCC ATAGTGCAGC CCATTACCGG TGTGAATGCA
ATTTTGTTCT ATGCGCCTAT GGTGTTTGAG CAGACTGGTG TAGGAACTAA TGCCGCATTT
ATGCAAACAA TTATCGTTGG GCTTGTGAGC TTGGTGTTTA CGGTGGTGGC ATTATCGTGC
ATAGATAAAT TTGGCCGCAG GCCGCTGGTT ATTGTTGGTT TGTTGTGGTC GGTGCTCAGT
TTATTTATGT GTTTCTGGGC GTTTAACGAG GCTACCTATT TGTTGGAGGC TTCACACCTT
GCTGAGTTGG CGGGCACTTT AGATCAGGCG CAATTGGGTG CCCTGCAAAA TATGATAGGG
GTGCAATATA GCAGCGACCT AGAATACAAA GCTGCATTGG CGCTTAATTT GGGGGCGGAA
TCTGCACGCG CTTACGAAGG GGTGCTTATT CAATTGGCGG CAACCATGAA TGGCTGGTTG
GTAATTCTAG GTATTATTGG TTTTATTGCT GCCTTTCACC TTTCTATTGG GCCTATTATG
TGGGTAGTGT TTTCCGAAAT TGTTCCCATT CATGTGCGTG GTGTGGCTAT CCCCATGTTT
GCATTTGTAA CCAGTTTGGT GAGTTTCTTT GTGCAAAAAC TGTTTCCATG GCAGTTAAAT
GTTATGGGCG CGGCAGAAAT ATTTTTATTT TACTGTTTGT CTGGTGCGGC CGGTTTGGTG
TTGTTGTGGT GGTTTTTGCC AGAAACTAAG GGCAAAACAA TCGAGCAAAT TGCCGATGGT
TTAGCGGGAG AGCAGCCCGC TTCATCTCGC GTGTCGACTT CTGCAAGCTA G
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| Protein sequence | MGVSSRTAFQ FAAIVAMGGF IFGLDAALIS GTVRFVTAEF GLNDLQLGSV VSAPGFGVLF
ALIAAGPLCD RIGRKYTLII IAALYVLSAV FSVIAPSYEA LVAARFIGGL AFASLSLASM
YIGEIAPADM RGKLVSMNQI TIVVGLTAAY FFNYFLLELA GSGAQWVQTV GLQQNLWRWM
LGVEILPALV WLLLLLRIPE SPRWLIAKNR IDDAKHALQR LVPAEKVEEN LASICNAVHG
EVLAPSFAKQ FSMLFDSRLK RAMIVGLAFA IVQPITGVNA ILFYAPMVFE QTGVGTNAAF
MQTIIVGLVS LVFTVVALSC IDKFGRRPLV IVGLLWSVLS LFMCFWAFNE ATYLLEASHL
AELAGTLDQA QLGALQNMIG VQYSSDLEYK AALALNLGAE SARAYEGVLI QLAATMNGWL
VILGIIGFIA AFHLSIGPIM WVVFSEIVPI HVRGVAIPMF AFVTSLVSFF VQKLFPWQLN
VMGAAEIFLF YCLSGAAGLV LLWWFLPETK GKTIEQIADG LAGEQPASSR VSTSAS
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