| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2636 |
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| Symbol | |
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| ID | 3968533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3335102 |
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| End bp | 3336967 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921734 |
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| Product | DNA mismatch repair protein |
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| Protein accession | YP_528108 |
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| Protein GI | 90022281 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000119439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.352688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAAC ATCAATTCAG CAAAGCGCTG CGTGCGCTAG GCTTTGGTGG GGCTGTGTTT
GCGGCATCGC TAATGGCTAG CCAAGCAAGT GCCCTTGAGT GTGAGCATTC AATCAGTAAT
GATTGGGGCG CCGGCTTTAC CGGTGCAATG AAAGTTACCA ATAATGACTC TAGCCCCATT
ACCGGTTGGC GGGTCGAATG GGCGTATAGC GGCAATGTAA ATATTGTTAA TTCGTGGAAC
GCCTCAGTAA CAAAAGGCAG TAATTATGTT GCCGTAGATG CCGGATGGAA TGGTAATTTA
CAGCCGAGCC AATCTACCGA ATTTGGCTTA CAGGGTGATG GCGCCGATAG AAATGTAACC
ATTATTAGTT GTGTTGCCGA AGGCGGATCA TCTTCTAGTT CATCAAGTTC TTCCAGCTCC
TCAAGTAGTT CTTCATCTAG CTCAAGTACT TCTTCATCGA GTAGCTCAAG TTCCTCGACG
AGCTCTTCTT CTAGTTCGAC TTCTAGCTCT TCTTCAAGCA CCTCTTCTAG CTCATCGTCC
AGTTCATCAA GCTCTTCTTC GGGCGGCAAC TGTGTTGCAA TGTGTAATTG GTACGGTGAA
AACCGCCCTG TTTGTGCCAA TCAAAATACT GGTTGGGGGT GGGAAAACAA CCAAAGCTGT
ATAGGTGCAA ACACCTGTAA CGATCAATGG GGCGACGGGG GCGTGGTGTC CAGCTGTGGT
ACGTCTAGCT CTTCATCCAG TTCTTCGTCC AGTTCGTCTA CCAGTTCATC CTCGTCTTCT
AGCTCGAGCA CCAGCTCTAC AAGCAGCTCA TCAAGCTCTA GTTCGTCGTC TGGTGGGTTA
AGCGCGGTAG AGTTTTCGCA GCAAATGGGC TTGGGGTGGA ATCTTGGAAA CTCCCTAGAA
GCGATTGGTG GCGAAACCGC GTGGGGCAAC CCAATGGTTA CGCAGCAATT AATTAACTCC
ATAAAAGCTG CTGGGTTCGA CACTATTCGC ATTCCGGTTG CGTGGAGCCA ATTCTCGGAC
GAAGCTAATT TTGTTATCAA TAGCAATTGG ATTGCACGCG TAGAAGAAGT AGTGAACTAC
GCATTGAGCG CCGATATGTA CGTGGTAATG AACCAACATT GGGACGGCGG TTGGATGCAG
CCCACATATG CACAGCAAGA ATATGTTAAC AATCGCTTGC AAATTATGTG GACGCAAATA
GCTAATCACT TTAAAGATTA CGATAGTCGC TTACTGTTTG CAGGCACCAA CGAAGTGATG
GTGGAAGGCG ATTACGGTAC GCCCACCTTC GAATACTACA CAGTACAAAA TAGCTTTAAC
CAAACGTTTG TGGATGCTGT ACGTGCAACC GGTGGCGCTA ATGCTAGCCG TTACTTAGTG
GTACAGGGGT TTAATACCAA CATAGATCAC ACGGTGAACT TCGCGGTAGT GCCAACCGAC
CCGGCAACAA ACAGGTTAAT GATGGAAGTA CACTATTACG ACCCCTATAA CTTTACGTTA
AATACCAACA GCAACATTAC TCAGTGGGGC GTAATTGCAA CTGACCCTAG CGTTACCGAA
ACATGGGCGA ATGAATCTTA TGTGGATGCG ACTTTCCAAA AAATGAAAAC TAACTTCGTT
GATCAAGGTA TAGCGGTAAT TTTAGGTGAG TACGGGGTTG TATCGCGCGC GAATGTGGCC
GGGCACGAAA CTTACCGAGA GTATTGGAAC CAATACATTA CTCAATCTGC GGTAGATCAT
GGAATGGTGC CTATTTATTG GGATAACGGT TATTCCGGTG ATGGTGGTAT GGCATTGTTT
GATCGCGCCA GTGGCAATCA ACTTTACCCC AATATTATTA ACGCAATTAT CAATGCCGGT
AACTAA
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| Protein sequence | MLKHQFSKAL RALGFGGAVF AASLMASQAS ALECEHSISN DWGAGFTGAM KVTNNDSSPI
TGWRVEWAYS GNVNIVNSWN ASVTKGSNYV AVDAGWNGNL QPSQSTEFGL QGDGADRNVT
IISCVAEGGS SSSSSSSSSS SSSSSSSSST SSSSSSSSST SSSSSSTSSS SSSTSSSSSS
SSSSSSSGGN CVAMCNWYGE NRPVCANQNT GWGWENNQSC IGANTCNDQW GDGGVVSSCG
TSSSSSSSSS SSSTSSSSSS SSSTSSTSSS SSSSSSSGGL SAVEFSQQMG LGWNLGNSLE
AIGGETAWGN PMVTQQLINS IKAAGFDTIR IPVAWSQFSD EANFVINSNW IARVEEVVNY
ALSADMYVVM NQHWDGGWMQ PTYAQQEYVN NRLQIMWTQI ANHFKDYDSR LLFAGTNEVM
VEGDYGTPTF EYYTVQNSFN QTFVDAVRAT GGANASRYLV VQGFNTNIDH TVNFAVVPTD
PATNRLMMEV HYYDPYNFTL NTNSNITQWG VIATDPSVTE TWANESYVDA TFQKMKTNFV
DQGIAVILGE YGVVSRANVA GHETYREYWN QYITQSAVDH GMVPIYWDNG YSGDGGMALF
DRASGNQLYP NIINAIINAG N
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