Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2615 |
Symbol | |
ID | 3968608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3311890 |
End bp | 3313293 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637921713 |
Product | antirepressor regulating drug resistance signal transduction N-terminal membrane component-like |
Protein accession | YP_528087 |
Protein GI | 90022260 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGTGG TTGTGAGTTA TGGCCTATTG CCCAGTGTAG GTGTACCGCT AGTACCAAGT GAATGGATGC AGCAAGGCAC AATCGATATT GCCAGTTTAT TTCAACAGGA AAGTATTGGG TTTTACTTAC TTGTTAGCGC GGTTGCTGTA TTTATGTTGG GTATTGTGTG GGGCATAAGC TACCTGCTTA ACGGAATAGC CGAAATACAC AGGCTTACTC GCAATGCGAG CCAGTGTACG AATAAAAAAA TATTAAGCTG CTTAAACCAA AGTAAAGCCG CACTGCAAAT AACTGGGCGG GTAGAGCTAA AGCTAAGTGA AGGTATTAAC GCACCAGTAA TGTGGGGCGT AGTTAACCCC ACAATTTTAT TACCAGCAAA AAGTGAGCAG TGGCAAGAAG GCGTGCTGCA GCGTGTATTG GCCCACGAGC TAGCGCACAT TAAGCGCGCA GACTGGCCAG TAAAAATGAG TGTGCATATA TTGTGCTGCT TGTTTTGGTT TATACCACCT GTTTGGTGGC TAGCTAAAAA GCACGAGTGG TTTGCAGAGT TAGCATGTGA CGATATGGTG GTTAACGCTT TGCATTGTCG CGCCGAGTAT GCCAACGATT TGTTGAATTT TGCTACCCAC GAAAACCAGG CGTCTATAGC TACCCTTGGT TTTATGAAAA AGTCCGAGCT TTACTTACGC ATAAACGCTG TATTAGATGG TGCTAAACAG CGCAGCGCGA TAAATACTAA AGAAAAATTA TGGTTGTTAA TTGTGTGGGT TGGCTTGCTG CTGCCTATGT CGGTGGCGCA AGCCTTACCT AAGGCGAGTA GCCAGTATGT GCAACCCGTG GAATATTTTC CCGTATGGTT GCCGACAGGT AGCAGTGAAA AGTCGCGCAA GAGTAAGTCT GCCATTTTTA CTGCGGAGCA ACCTAAGGTA TTAACGTTAA CCGATTTACA AACACATTTT TCGTCGGTGC CAACTACTTA TCGTACTAAC GAAACAATGC GAATAACGGC AAGCCGTGCT GATGCTCTTA CAGCGTCAAA CAGTGGTGTA GATGTTCCGC AAAACCCTGC AGCGCTTGAA CAAGCGTTAG TGCACGGGTT AGAGCAGCGC CCACAAGTTA AGTTAGAAGG TTTTTTGCCC GTAAATTTGG TGTCGCCCAG CTACCCATCG CGCGCGTTAG AGCGGGGTGT AGAAGGCAGA GTTACAGTGC AGTTTGATAT AGATACCAAG GGTAAGGCTG TTAACGTAAA AATTGTGCAA TCAACCGCAC GCGGCATATT TGATAAGGCA GTGCTAAAAG CGTTGGAGCA GTCGCAATTT CAGCCAATAC GTGTAAATGG CCATCCAATT ATTACAAAAA ACGTCAACGA AACGTTTTTA TTTACGCTAG CTTCCAACCA GTAA
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Protein sequence | MLVVVSYGLL PSVGVPLVPS EWMQQGTIDI ASLFQQESIG FYLLVSAVAV FMLGIVWGIS YLLNGIAEIH RLTRNASQCT NKKILSCLNQ SKAALQITGR VELKLSEGIN APVMWGVVNP TILLPAKSEQ WQEGVLQRVL AHELAHIKRA DWPVKMSVHI LCCLFWFIPP VWWLAKKHEW FAELACDDMV VNALHCRAEY ANDLLNFATH ENQASIATLG FMKKSELYLR INAVLDGAKQ RSAINTKEKL WLLIVWVGLL LPMSVAQALP KASSQYVQPV EYFPVWLPTG SSEKSRKSKS AIFTAEQPKV LTLTDLQTHF SSVPTTYRTN ETMRITASRA DALTASNSGV DVPQNPAALE QALVHGLEQR PQVKLEGFLP VNLVSPSYPS RALERGVEGR VTVQFDIDTK GKAVNVKIVQ STARGIFDKA VLKALEQSQF QPIRVNGHPI ITKNVNETFL FTLASNQ
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