| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2602 |
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| Symbol | glnD |
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| ID | 3968595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3299450 |
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| End bp | 3302152 |
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| Gene Length | 2703 bp |
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| Protein Length | 900 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921700 |
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| Product | PII uridylyl-transferase |
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| Protein accession | YP_528074 |
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| Protein GI | 90022247 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
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| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAC CCGCTGCTCG TCAGTTCCCT CAGGTAGCCA CCCAACCTAT CTTTTTTAAT
CAGGCTCGTT TTCGTGAAAA CCTCGCAAAC AAGCCGCCAG TGGTGGTATT TAAAGATGCA
ATAGCGGGTG TGAACCAACA GTTTGACCAA CGCTTTTTAG AGGGCGAAGA TATTCGCCAC
CTTATTCACG AGCGCGCACA ATTTATAGAT TTAATACTGC ATTACGCGTG GCACCATTTT
GACTGGGGCG ATGATATATC ACTCATCGCC GTTGGCGGAT ACGGCCGCGG CGAGCTGCAC
CCCCATTCAG ATATCGACAT ACTCATATTA CTCGATAACA AGGTTGGTAC CGAGTACAAC
GAAACGCTGC AATCTTTTGT CACCATGCTG TGGGATATAG GCCTAGACAT AGGCTCCAGC
GTGCGCACCT TGCAAGAATG CATAGATATA GCCCGCGAAG ACATTACCGT AGCAACCAAC
CTTATAGAAG CGCGCCGCAT TGCCGGCAAC GACAGCCTGC GCGACCAATT ACAAATACTT
ACCGATGCTA AACACATGTG GCCCATTCGC GATTTTTATC AAGCGAAATG GGAAGAGCAA
GAAAAGCGCC ACGAAAAACA CAACAATACC GAGTACAACC TAGAACCCAA CATTAAAAAC
GCGCCGGGCG GCCTGCGCGA TATACAAATG ATTAACTGGG TTGCCAAACG CTACTTCCAA
GTGCAAACCC TTTTGCAACT GCAAGGGCAA GACTTTTTTA CCGAACACGA ATTCGGTATT
TTGCGTCGCG GCGAAGAGTT TTTATGGCGC GTGCGCTACG GTGTACATAT GCTCGCAGGC
CGCGCCGAAG AGCGCCTACT GTTTGAATAC CAGCGCGAAC TCGCCACTAT TTTTGGCTTT
CAAGAAAACG ACAAACGTTT AGCCGTCGAA CAATTTATGC ACCAATACTA TAAAACGGTA
TTGGCACTGC GCGAATTAAA CGATGTGCTG CTGCAGTATT TGCAAGAAAC TATCGAAGAA
AAAGTGGCAC CAACTATTGT GCCCATCAAT GAACGCTTTC AGCTTTGCGA TGGCTTTATC
GAGGTTATCC ACCGCGATGT ATTTGACCAA ACCCCCAATG CATTGTTGGA AATATTTGTG
CTTATGGGGC AAGACCCAAG CATAAAAGGT GTACGCGCAG AAACCATTCG CCTTATTCGC
GAGCGCCGCT GGTTAATAGA TGAATCATTT AGAAAAGATC CAGAAAACAA CCGCATGTTT
ATGCAATTGT TTCAGCTGGA TTACGGCCTA ATATCGCAAT TAAAGCGCAT GAAGCGCTAC
GGTATACTCG GTCGCTACCT ACCCGAGTTT GGCAAAATTA CCGGCCAAAT GCAGCACGAC
CTATTCCACC GCTACACAGT GGATGCGCAC ACACTGCTAG TCATTAAAAA TATTCGCCGC
TTTCGCTACC CGGATGAGAA AAAGCAGTTC CCTATTGCCG CCCACATTAT GAAGCGCATG
GAAAAACCAG AGCTTTTGTA TATTGCCGGC CTGTACCACG ATATAGGCAA AGGCCGCGGC
GGCGACCACT CTCAGCTTGG CGCTGTAGAC GCCGCAGCAT TTTGCCAGCA ACACGGTTTT
AGCGCGCGCG AAACACGTTT AGTAGTGTGG CTGGTAGAAA AGCATTTGCT CATGTCTTAT
GTATCGCAAA AGCAGGATAT TTCAGACCCA GAAGTCATTC ATAACTTCGC ACTGCAAGTG
GGTGATCGCC TGCACTTAGA CTACCTCTAC GCGCTAACCG TTGCCGATAT GTGCGGCACC
AACCCAGAGG TGTGGAACAC TTGGCGCGCA AGTTTAATGC GTCAACTTTA CTTAGAAACC
AAACGCGCAC TGCGCCGCGG CTTAGAAAAC ACCATCGATC AAAACGAGCT AATTGAAGAA
ACTCAACAGC TTGCTCTGGC CAAACTTGCA GATAAAAACA TTTGCGAAAA TCAGGCGCGC
GCAATTTGGT CGGTAATGGG CGATGAGTAT TTCGTGCGCG AAGGGCACAT TGATATTGCC
TGGCAAACCG AAGCGATTGT TACCAACCCA AGCGACGAAA ACCTCGTGCT TATTCGTGAA
ACCACCAGCC ACGAATTTGA AGGCGCCACC CAAATTTTTG TTCGCGTTAA AGATGCGCCC
CACGTATTTA CCGCCGTAGC CAATGCCCTA GCTCAACAAA ACCTAAACAT TCAAGATGCC
AGAGTTTACA GCGCCGCCAA CGGCTACACC GCCGACACCT TCTATGTGCT AGACGACAAC
TTCCAACCGA TTGGGGACGA CCCCGCCCGC AGTGAAAAAA TTCGCGAATC GGTTTTAGAA
GAGTTGCGCC TAGTAAGCGG TTATCGCGAT GTAGTAAGTC GCCGCACTCC AAGGCAGTTA
AAACAGTTTG CCGTACCCAC GCGTACTTAC ATTAGCAACG ACATAGTATC TGGCCATACC
GTACTAGAAG TAATTAGCCC AGACCGCCCC GGCCTACTCG CCACCATTGG TCGAGTATTT
ATGGATATGG ACATCCAATT GCAAAACGCA AAAATTTCCA CCTTGGGCGA GCGCGTAGAA
GATATATTTT TCATATCAGA CATAGAGGGC AACCCGCTAA GCGACCCCAA CCTATGCGCA
GAATTGCAAA AAGAAATATG TAAGCAGCTC GACCTTAGAG TAGAAAAAGA TTTGGCTCGA
TAA
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| Protein sequence | MSQPAARQFP QVATQPIFFN QARFRENLAN KPPVVVFKDA IAGVNQQFDQ RFLEGEDIRH
LIHERAQFID LILHYAWHHF DWGDDISLIA VGGYGRGELH PHSDIDILIL LDNKVGTEYN
ETLQSFVTML WDIGLDIGSS VRTLQECIDI AREDITVATN LIEARRIAGN DSLRDQLQIL
TDAKHMWPIR DFYQAKWEEQ EKRHEKHNNT EYNLEPNIKN APGGLRDIQM INWVAKRYFQ
VQTLLQLQGQ DFFTEHEFGI LRRGEEFLWR VRYGVHMLAG RAEERLLFEY QRELATIFGF
QENDKRLAVE QFMHQYYKTV LALRELNDVL LQYLQETIEE KVAPTIVPIN ERFQLCDGFI
EVIHRDVFDQ TPNALLEIFV LMGQDPSIKG VRAETIRLIR ERRWLIDESF RKDPENNRMF
MQLFQLDYGL ISQLKRMKRY GILGRYLPEF GKITGQMQHD LFHRYTVDAH TLLVIKNIRR
FRYPDEKKQF PIAAHIMKRM EKPELLYIAG LYHDIGKGRG GDHSQLGAVD AAAFCQQHGF
SARETRLVVW LVEKHLLMSY VSQKQDISDP EVIHNFALQV GDRLHLDYLY ALTVADMCGT
NPEVWNTWRA SLMRQLYLET KRALRRGLEN TIDQNELIEE TQQLALAKLA DKNICENQAR
AIWSVMGDEY FVREGHIDIA WQTEAIVTNP SDENLVLIRE TTSHEFEGAT QIFVRVKDAP
HVFTAVANAL AQQNLNIQDA RVYSAANGYT ADTFYVLDDN FQPIGDDPAR SEKIRESVLE
ELRLVSGYRD VVSRRTPRQL KQFAVPTRTY ISNDIVSGHT VLEVISPDRP GLLATIGRVF
MDMDIQLQNA KISTLGERVE DIFFISDIEG NPLSDPNLCA ELQKEICKQL DLRVEKDLAR
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