Gene Sde_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2588 
Symbol 
ID3968638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3281998 
End bp3282504 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content41% 
IMG OID637921686 
Producthypothetical protein 
Protein accessionYP_528060 
Protein GI90022233 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.92104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTG GCAAGATTGT AATCGCATTA TGTTTAACCG TAGTGGCTCC TTTTGCAGCT 
GCTGGCAAGG TTGTTGTGTT GGATCATCAA ATAGCTATGC TTGCTACCGA CTTTGCAAAA
AGCCGTTTTG AAGCATTACA AGCTAACCCA GAGTTTTCTA AAGTGGTTGC ACAATACGAA
ACACTAAGTG CCGACTTAAC AGCGCTTGGT AAAGAAGCAG AAACAAAAGG TATGACTTGG
GGCGCAGAGC AAGTTGCTAA TCACCGCAAA AAAGAAGAGT ACATAAAAGC AGATTTGCAG
TTGGCTTATC AAAAAATACA GGCAGAGCGC AAAGCGGCTA ACGAAAGTAT TATTCGTGAA
TTGCAACCTA AGCTTGAAGG CGTGCTAAAC AAGCTTATCG AGTCTGAAGG TATTGATATT
ATTCTTAGCA AGCAAGCGGC TTTTTACGCG AGTGAAAATG CAGATATCAC CCGTAAGGTT
GTAGATGCTT TAAACAAAGC TAAATAA
 
Protein sequence
MKFGKIVIAL CLTVVAPFAA AGKVVVLDHQ IAMLATDFAK SRFEALQANP EFSKVVAQYE 
TLSADLTALG KEAETKGMTW GAEQVANHRK KEEYIKADLQ LAYQKIQAER KAANESIIRE
LQPKLEGVLN KLIESEGIDI ILSKQAAFYA SENADITRKV VDALNKAK