| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2574 |
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| Symbol | |
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| ID | 3968683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3268464 |
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| End bp | 3269534 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921672 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_528046 |
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| Protein GI | 90022219 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTACCG TATTTAAACG TTGGCTCGAA CGCTATTTCG CTGACGAAGA AGCTGTTCTG
GTGGCAGTGC TATTGGTCGC GAGCGTTATC ATTATCGTAA CCATGGGCGT GGTGCTTGCT
CCTATGATTG CCGCGGTAAT TATCGCCTTT TTAATGCAGG GTATTGTGGC TCGGTTAAAA
ACTTGGGGGG TTAGCCACAT TGTTGCGGTA AGTATTGCCT TTCTGATTTT GGCCGGTTCG
CTGGTAGTGA TGCTTATTTA CCTCTTGCCA GCGCTGTGGC AGCAGGTGCT TAACTTGTTT
GCAGAGGCTC CGCGCATGTT AAAAGACGGC CAGTCATTAC TCTTATTGCT GCCTCAAGAA
TACCCTGCGC TTATAACCGA GGATCAAGTA AAACAGTTAA TGGGCGCTCT GCGAACAGAT
CTCGCGCAAG CAGGCCAAAC GGCGGTTTCT TTTTCGCTGG CCCAGCTGCC TATTATTGTT
GCTGCACTTA TCTATTTGGT ATTGGTGCCT ATATTAGTGT TCTTCTTTTT AAAAGATGGC
CAGCAAATGC TGGGTTGGGT TGCGAGTGTG TTACCGCGTG AGCGCCCAGT AATGCAAAAG
ATTTGGCGAG AAATGAACCA ACAAATAGCC AACTACGTAC GCGGCAAGGT AATTGAAATT
GTTATTGTAG GTGGGGTGAG CAGCTTAACG TTTAGCTTGC TAGGTCTGCG ATATGCGCTA
CTTTTAGGTA TCGCGGTAGG GTTTTCGGTG CTTGTACCTT ATATAGGCGC GGCTATTGTA
ACGCTGCCTG TGGCGGCTAT TGGTTTTTTC CAATTTGGCT GGGGTACAGA ATTTTTGTAC
ATCATGATTG CTTACACCAT TATCCAAGCA TTAGATGGCA ACGTGCTTGT GCCGCTATTG
TTTTCTGAAG CGGTGAAGAT GCATCCGGTT ATGATTATCC TTTCCGTGTT GGTTTTTGGC
GGTTTCTGGG GCTTTTGGGG TGTGTTTTTT GCAATTCCGC TTGCAACTCT GTGCAAGGCC
ATTTTAAATG CGTGGCCGAC TAAAGGCTCG CCTATTGCGG GTAACGTATA G
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| Protein sequence | MITVFKRWLE RYFADEEAVL VAVLLVASVI IIVTMGVVLA PMIAAVIIAF LMQGIVARLK
TWGVSHIVAV SIAFLILAGS LVVMLIYLLP ALWQQVLNLF AEAPRMLKDG QSLLLLLPQE
YPALITEDQV KQLMGALRTD LAQAGQTAVS FSLAQLPIIV AALIYLVLVP ILVFFFLKDG
QQMLGWVASV LPRERPVMQK IWREMNQQIA NYVRGKVIEI VIVGGVSSLT FSLLGLRYAL
LLGIAVGFSV LVPYIGAAIV TLPVAAIGFF QFGWGTEFLY IMIAYTIIQA LDGNVLVPLL
FSEAVKMHPV MIILSVLVFG GFWGFWGVFF AIPLATLCKA ILNAWPTKGS PIAGNV
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