Gene Sde_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2546 
Symbol 
ID3968712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3228871 
End bp3229314 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content46% 
IMG OID637921644 
Producthypothetical protein 
Protein accessionYP_528018 
Protein GI90022191 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0786863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000802946 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAAAT TTAAAACTCT TACCATCGGC TGCGTTATTG CGGCCTGCGC ACTTAGCAGC 
GCTTCCACAG TGATGGCTGC AGAATACTGG CGCTGGAAAG GTGCAGATGG CGTTATACAT
TACGGCTCCA CCCCACCCAA AGGTGTAGAA GCCGAAAAAG TAGTGACCTA TGGCGGTGTA
TCTAAATCTG CCAATACGAA CACCAACTCA CAAACGAATG GCGACACAGC TGAAGACACA
GAACCTAAAG TGGAACTAAC CCCAGAAATG CAAGCACTAA AAAAAGAGCG CTGTGAAGAA
GAAAGAAAAC GCCTAGCAGT ATTTGAAAAA CCCGGACGCA TCCGCATGAA ACAAGCGGAC
GGGAGCACTA AATATTTAAG CGTTGAAGAA ATCCAAAAAG AAATTGCCAC CACCAAACAG
GTTATAGCCG ATACCTGCAA CTAA
 
Protein sequence
MNKFKTLTIG CVIAACALSS ASTVMAAEYW RWKGADGVIH YGSTPPKGVE AEKVVTYGGV 
SKSANTNTNS QTNGDTAEDT EPKVELTPEM QALKKERCEE ERKRLAVFEK PGRIRMKQAD
GSTKYLSVEE IQKEIATTKQ VIADTCN