Gene Sde_2510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2510 
Symbol 
ID3968792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3180680 
End bp3181351 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content44% 
IMG OID637921601 
Productacetolactate synthase small subunit 
Protein accessionYP_527982 
Protein GI90022155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0180225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACC AAAGTAGTCT CAATTTCGAA GACCTTAACC TTAGTATTGG GCAGATAATT 
CAAATTCATC CTAGTCCCAA CTCAAAGGAG CGGTTTGACT GCATGCTTGT AGGGTGCCTG
CCCGGTGAAG CCGTTATGAT TACAGCTCCA CCTTCGGGGG AGTTTCCTAT TGTGAAAGAG
GGGCAAAAAG TTGCAATTCG GGTGATGTCA TCCAATGGGG TTGCATTGTT TCCAACTACA
GTTTTATTCG TGGGCGATGT ACCTGTTTTT ATGGTGTACC TCGACTTCCC CAAAGCTATT
CAATTTAAGC TTGTTCGCAA TGCCACGCGA GTGGATGTTG CCTTACCCAT TTTGGTGTCC
AATAAATCTC GCCAAGGCGT GCGAGGTGTG GTGGGCAAAA TAACGGATAT TAGTACCACT
GGTGCTCGCA TTAATGTGTT TGATGATGTG GGAGAGGCCG GCGAGCTCAT TGAGTTAAAA
GGTAAGTTTG AAGTTGGCGA AATTCGACGC AAAGTAAATG TAGAAGCAAT TATCCGCTCT
AAACCAGAAA TTACCGGTGA AGTGGTTACC TATGGCGTGG AGTTTCATGA AGAAGACGAA
GAAAAGTTAA TCGTACTTTT TGGGTTTATT TTTAGTGCAA TCGCTTATGG TAAATCGCAA
ACCGTTCGTT AG
 
Protein sequence
MTNQSSLNFE DLNLSIGQII QIHPSPNSKE RFDCMLVGCL PGEAVMITAP PSGEFPIVKE 
GQKVAIRVMS SNGVALFPTT VLFVGDVPVF MVYLDFPKAI QFKLVRNATR VDVALPILVS
NKSRQGVRGV VGKITDISTT GARINVFDDV GEAGELIELK GKFEVGEIRR KVNVEAIIRS
KPEITGEVVT YGVEFHEEDE EKLIVLFGFI FSAIAYGKSQ TVR