| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2495 |
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| Symbol | |
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| ID | 3968572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3153784 |
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| End bp | 3154923 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637921586 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_527967 |
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| Protein GI | 90022140 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.939158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGGTC GCATTTTTAA TATTCATGAT GTTGTGCTTA TTGTTACCAT AATGGAGTGT
CTACTGCTGG CGCTTTTTCA GTTGGCAATA CCATCTGGCA CTAAAAAAGA TAAAGCCTTG
CTTAGCGCAT TTTTGGCATC TATTGCGATA AGTTCTGTGG GCGTATTGTT GCTTTGGAAC
GATTCTATCT CGTTGGGTAG CTATTTTGAT AATAGCCTGT TGCCGTATTT TTTAACTGTA
AGTTTGCTTG CGCGTGGGCC GCTACTCTTT CTTTATGTGC AGTACCTAAC CAAAGAAAAC
GCAATCATCG CGCGTAGGCA CATCGCCTAT TTTTTACCTA TTCCTATTTT TATTGGTTAC
ATTTATTGGT TTGGGGTGCA ATCAGACCAC CTAACAATGC GGGCAGAGGA AGAGGCGCAA
AAACAAATAG CCAACGTAAT TTGGGACTTT GTTAAATATT TCACGGTCGC CTTCGCGGTG
CTATCAATTC TGTATATTCG GCAGTATCAA TTGCGATTAA AACAGCAGTT TTCTGCTGTT
TCTATGGGTG CTGTTGCGTG GTTATATTTA CTTACGGCGG GTTTTTTACT TAGTTGGGCG
TGGGGCATTG TTACCCATCT TTTGTCGGGG CAGGGGCTTA TTCCATTAGT GCTTGCCAAT
GCATTTGGTT TAGCTGCCAA CTACATGACG TTTATATTAG TAAATAGCTT ATTTGTGTAC
AGTTTGATTT ACGCCCACAG TGCTTTGCGA ACAAATCAAG ATGCAACCAC CCCAATAGTA
GAGGCAGAAA TAGAAGACAC TGCACCTAAT AGAATAAAAT TTGCCATGGA GCACGATAAG
GTTTATTTAA AGCCTAACCT AAGTATAGAG GCGCTGGCTA AGCGGATAGA TTTACCGGTT
AAAACTGTTT CTAGTGTTAT TAATGTTCAG TTTAATACCA ATTTTTTTGA ATATGTGAAC
ACCCATAGGG TAGAAGCAGC AAAGGCGTTG CTTGCACAAC CTGAGCACGC CAAAACCCCA
GTCGCAGAAA TAATGACATT GGCGGGCTTT AGCAGTAAAT CGGCTTTTCA TCGTTTTTTT
AAACGCGTAA CCAATATGTC TCCTTCGGAA TATAGAAAGC AGCACGCTGA AAGTAATTAA
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| Protein sequence | MLGRIFNIHD VVLIVTIMEC LLLALFQLAI PSGTKKDKAL LSAFLASIAI SSVGVLLLWN
DSISLGSYFD NSLLPYFLTV SLLARGPLLF LYVQYLTKEN AIIARRHIAY FLPIPIFIGY
IYWFGVQSDH LTMRAEEEAQ KQIANVIWDF VKYFTVAFAV LSILYIRQYQ LRLKQQFSAV
SMGAVAWLYL LTAGFLLSWA WGIVTHLLSG QGLIPLVLAN AFGLAANYMT FILVNSLFVY
SLIYAHSALR TNQDATTPIV EAEIEDTAPN RIKFAMEHDK VYLKPNLSIE ALAKRIDLPV
KTVSSVINVQ FNTNFFEYVN THRVEAAKAL LAQPEHAKTP VAEIMTLAGF SSKSAFHRFF
KRVTNMSPSE YRKQHAESN
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