| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2472 |
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| Symbol | |
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| ID | 3964919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3122484 |
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| End bp | 3123155 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921563 |
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| Product | anti-sigm factor, ChrR |
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| Protein accession | YP_527944 |
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| Protein GI | 90022117 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3806] Anti-sigma factor |
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| TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.483016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAACT TTCACCCAAG TGACAACACA TTAATAGAAT ACTCCGCAGG TAACCTACCT
GCCGCACTAG CAATTTGCGT AGCCGCACAC CTAGAATATT GCCCCCAATG CAGCCACCGC
GCTAGCCAAC TCAATTCGCT GGGTGGCACC CTGCTAGAAA CCAGCGCAAA AGCTCAAGTG
GCCAGTACTA GCTTTACCCA ATTAATGGCT CGCATTCAAG CTGCGCCCAC TATGGGCGAC
ATCAAAGCGC CTGTGGCTAC AGCAACAAAA ACAAGTGCTA AGCCAAACTT GCCCAAAGTA
ATAAATAAGC TTATTCACCC CGCAAGGCCA CTAAAATGGA AGCGAGTATC ACCCGCGTTA
AAAGAAGCCA TTGTTACTGT AGGCCAAGAT CAATATGAAG TGTGTTTTCA CCGCATAAAA
CGCGGCGGCA AGGTGGCGGA GCACGACCAT GGCGGCACAG AAATCACTGT TGTATTGGAA
GGAAGTTTTT CTGATGAACT AGGCACCTAC ACGGTAGGCG ACTATATAGA AAAGCAACCG
GGAGACATTC ACCGCCCCAT GGCCACCCAA AATGAAGACT GTTTATGCCT GTCTGTAAGC
GAAGCCCCAG TAAAAATAAC TGGTTTGCTG GGTAAATTAA TTAACCCGTT CATTTCTTTT
GCACCGCGCT AA
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| Protein sequence | MANFHPSDNT LIEYSAGNLP AALAICVAAH LEYCPQCSHR ASQLNSLGGT LLETSAKAQV
ASTSFTQLMA RIQAAPTMGD IKAPVATATK TSAKPNLPKV INKLIHPARP LKWKRVSPAL
KEAIVTVGQD QYEVCFHRIK RGGKVAEHDH GGTEITVVLE GSFSDELGTY TVGDYIEKQP
GDIHRPMATQ NEDCLCLSVS EAPVKITGLL GKLINPFISF APR
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