| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2452 |
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| Symbol | |
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| ID | 3965399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3099529 |
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| End bp | 3100755 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921543 |
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| Product | hypothetical protein |
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| Protein accession | YP_527924 |
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| Protein GI | 90022097 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.883759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATA AACATATTGT TTTTTTAGTT GTGCTGGTGC AGTTCATTAA TGCATTAGAC
TTTGTATTAG TCATGCCCAT GGGCCCAGAT TTGGCCCTTG GGCTGGGGTT TGGATTGGAG
CATATCTCTT GGGTTGCGAG TAGTTACACC ATATCTGCTG CCGTGGTATC GCTTTTATCT
GTTATGCATT TAGATAAATT CGATCGCAAA AAAGTACTAG TGTTCTCGCT TATCGGTATG
CTGTTATCGA CTGCGATGGG CGGGCTATCT ACAGACCTTA CTAGCTTGCT GTTGTCCCGT
GTGTTGGCTG GCGGGTTTGG AGGTATGGCG ATCTCTATTG GTGTATCTAT TGTTGCCGAT
GTGGTGCCGC AAGAGCAGCG TGGTAAAGCC TTGGGTATGG TGATGGCGGG CTTTCCGTTA
TCGGCTATTT TAGGTATTCC GCTCGCACTT TATATTTCTG ATCAAACCAG TTGGCAAAGT
GCATTTTACC TATTAGCTGC ATTTATTTTT GTAGTGCTAC TCACCATTGT TTGGCAGTTG
CCAAAACTCG TGGGGCACCG CGAAGCGAAT CAAGGGTTGT TTGATTTGCG AGAGCTTATT
CGACGACCAG AGATGGGCAT AGGTATTTTG CTTGTTGGAA TATGTGTATT TCCAGCATTT
TTAATTGTGC CTCATGTGTC AACCATTAAT CAATTTAACT ATGGTTTTCC TCGGGCAGAT
TTATCTTACC TGTATTTAGC TACCGGAATT ATTAATCTTA TTTTTGTGTT AATAACGGGC
AGGTTAGCGG ACAAGTATTC GGCACTTACG GTGGGGTCTT TCTGGGCAGT AGTGTTGGCC
GCAGATATTA CGTTATGGAT GATCTTTGCT GTGTCGTGGC CGGTGGTAAT ACTGCATTTA
ATATTCTTTG TGAGTTTTAC CGCGTTAATG ATTCCATCTG CGTCTTTAGC CAGCAAAATC
CCCGCGGCTA ACCAACGAGC AGGTTTTAGT GCGCTGCAAT CGTTCTTCCA ATATCTGGCA
ACAGGGCTCG CCGCGTCGGC TTCATTTTTT GTTATTCATG CCGATGCTGA AGGCAACTTA
ATGAACCTTA AACAGTTGGG GTTAATTGCG ATTGCAAGCT TAGTGCTTAT TCCGGTGGCT
ATTTGGTTTA TTGAGCGGCG ATTGAAGCTA GCGAGCAAAC AGCGTTCGGT GGATGTCTCA
CCGGCTGTAA ACGATGCGGC GATATAA
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| Protein sequence | MQNKHIVFLV VLVQFINALD FVLVMPMGPD LALGLGFGLE HISWVASSYT ISAAVVSLLS
VMHLDKFDRK KVLVFSLIGM LLSTAMGGLS TDLTSLLLSR VLAGGFGGMA ISIGVSIVAD
VVPQEQRGKA LGMVMAGFPL SAILGIPLAL YISDQTSWQS AFYLLAAFIF VVLLTIVWQL
PKLVGHREAN QGLFDLRELI RRPEMGIGIL LVGICVFPAF LIVPHVSTIN QFNYGFPRAD
LSYLYLATGI INLIFVLITG RLADKYSALT VGSFWAVVLA ADITLWMIFA VSWPVVILHL
IFFVSFTALM IPSASLASKI PAANQRAGFS ALQSFFQYLA TGLAASASFF VIHADAEGNL
MNLKQLGLIA IASLVLIPVA IWFIERRLKL ASKQRSVDVS PAVNDAAI
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