| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2451 |
|---|
| Symbol | |
|---|
| ID | 3965398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 3098702 |
|---|
| End bp | 3099487 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637921542 |
|---|
| Product | thioesterase involved in non-ribosomal peptide biosynthesis-like |
|---|
| Protein accession | YP_527923 |
|---|
| Protein GI | 90022096 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.904446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.835593 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAA CGACAGAAAA CAAATATTTT ATTTGCTTTA GGCCCCGTAA AACAGTGCGT
AAAAAGGTAA TTTGCTTTCC TCCTGCTGGG GTGGGAGCGT CGTTTTATTC TAAATGGCAC
CAGCGAGTGC CCGACGATGT AGAAATTTGG GCGGCGCAGC TTCCGGGAAG GGAGTTTAAA
AGCGAGCAGG CTATGCCTAC CTTTTTAAAA GCGCTGGTTG GAGCATTTGT GGAAGACATA
GGTGAGCTGG CGCAAGGGGA TTATGAATTT TACGGGCATA GTTTTGGCGC TGCGCAAGCA
GTATTGGTTG CCCAAAGGCT AAGGGCAAAG CAGGCGCCTT CTAGAATTGT CGTGGCGGCG
CGCCGCCCTG TGCATTTGCC TTATACGGTG GAGCTGTCCC AACAAAGTGA TACAACACTG
TTTCGTTACT TGAATACATT AGGGGGCATA AGTCCCAGCG TTGCGGCCGA TAAATACGTG
CTTGCGCGTT TTATGAAGTT GGTGCGCAGC GACCTAACGC TAAATGAGCA AGCCTACGCA
GAGTGTGACG GTTTGGTGGC GTGTCCAATA GAATTCGTAG CAGCAGATGG CGATATTGCC
ATTAGCATTA AAGAGTCTGA ACGCTGGGGC GAGCTAACGA AAAAAGGCTT TAAGTTGCAT
TTGCTAGAGG GTGATCACTT TTTTGTGAAT GACCCAGAAC ACGCTTTTTA CAGCCAGATA
TATAGCAGCA AAAACGCACT GGAAACCACA AAAAAAGTGC AAATTGACGA GTTTTTCACT
TCCTAG
|
|---|
| Protein sequence | MIKTTENKYF ICFRPRKTVR KKVICFPPAG VGASFYSKWH QRVPDDVEIW AAQLPGREFK
SEQAMPTFLK ALVGAFVEDI GELAQGDYEF YGHSFGAAQA VLVAQRLRAK QAPSRIVVAA
RRPVHLPYTV ELSQQSDTTL FRYLNTLGGI SPSVAADKYV LARFMKLVRS DLTLNEQAYA
ECDGLVACPI EFVAADGDIA ISIKESERWG ELTKKGFKLH LLEGDHFFVN DPEHAFYSQI
YSSKNALETT KKVQIDEFFT S
|
|---|
| |