| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2446 |
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| Symbol | |
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| ID | 3965393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3091329 |
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| End bp | 3092003 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637921537 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_527918 |
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| Protein GI | 90022091 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.28656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCATTC TTATACTGGA AGACAACAGA GACATTGCAG AGAGCGTAGG CGAGTTTTTT
GAGCTTAACG GCCATCATAT CGACTATGCT ATGGATGGCC TAACCGCCAT GCACTTGGCG
GTTACTAATG AATACGACAT TTACCTATTC GACATAGGGG TACCAGGCAC TGATGGCATA
AGCCTAACCA AGCGCCTAAG AATTGACGGC AACGACCAAA CACCCATTAT TTTTCTAACT
GCGAGAGAAA CATTAGAAGA TAAAATAAAG GGCTTCGAGA GCGGCTGTGA CGACTACGTA
GTTAAACCTT TTCAACTAAA AGAACTGTTA GTTAGGGTAA ACGCCATTTA CAAACGTTCT
CAACCACAGA TCTCTAACGT AATAGATATA GCTGGTTTGA GAATCGATAA AAACAAGCAT
GAAGTAACAC GAGACAATGT AAACATTACC ATCACTCCCG TTTGCTATAA AATACTTCTC
ACCTTAGCAG AGTCTTCACC AAACGTGGTT AGCCGCGAAA AAATAGAAAG TATTATTTGG
AAAGATATCG CCCCATCTAG CGATTCACTT AAAAGCCACC TTTACAGCCT GCGCCAAAAA
GTAGACAAGC CCTTCGATTT CCCTTTAATA CACACCGTAT CGAAACAAGG CTTTAGGCTG
TATAAAGCGT CCTAA
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| Protein sequence | MRILILEDNR DIAESVGEFF ELNGHHIDYA MDGLTAMHLA VTNEYDIYLF DIGVPGTDGI
SLTKRLRIDG NDQTPIIFLT ARETLEDKIK GFESGCDDYV VKPFQLKELL VRVNAIYKRS
QPQISNVIDI AGLRIDKNKH EVTRDNVNIT ITPVCYKILL TLAESSPNVV SREKIESIIW
KDIAPSSDSL KSHLYSLRQK VDKPFDFPLI HTVSKQGFRL YKAS
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