| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2416 |
|---|
| Symbol | |
|---|
| ID | 3966073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 3058186 |
|---|
| End bp | 3060570 |
|---|
| Gene Length | 2385 bp |
|---|
| Protein Length | 794 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637921507 |
|---|
| Product | cation transport ATPase |
|---|
| Protein accession | YP_527888 |
|---|
| Protein GI | 90022061 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCATA GCTGCTTTCA CTGTGGGTTG CCTGCGCACG AACAATACAG CGCAACGGTA
GATGGCGAAC TCCGCAACTT TTGTTGTGTG GGCTGTCAAG CTGTTGCTAT GGCAATTGTA
GAAGGCGGCC TAGGAGATTT TTATCAGTAC AGAGAAAGCA CTAACCCAAA AGTAAAAGAA
GTGAGCCAGG CATACTTGGA GTTTGACCTA CATGAAGTTC AAGCCGATAT TATCTCCCGC
GTGTCCCAAT CTACTTTTCG AGTTAGGTTT TATCTCGAAA GCATTTCCTG TGCTGCATGC
GCATGGCTAA TTGAAAATTA TTTGGGCCAA ACAGAGGCAA TAAGTCGTGT GAGCGTGAAT
GCAACCACGC AAATTTGCAC TATCGAGTGG GATAAATCCA AGTTGCCGCT TAGCAGCCTA
ATGCATAAAT TGGAGTTAAT TGGTTACAGC CCGCGCCCAG CATCTAGCCA AGCCGCTGCC
GAAAGCGCGC GCAATATACA GCGTAGCCAC TTAATGCGTT TAGGTGTTGC GGGCATAGGG
ATGATGCAAG TGGGTATGGT CGCGGTGGCA TTGTATGCCG GCGGTATTCA AGGCATAGAA
AGTGGCTGGC AAGGTTTTTT GCGCTGGGTA AGTTTTGTAT TTGCCACACC GGTTATGCTT
TATAGCGCGC AGCCTTTTTT TTACAGTGCT TGGCGCGCAC TTAAGTTAAA AAGTTTGAAC
ATGGATGTGC CTGTATGCAT AGCTTTAGTG CTTGCTTACG GCGCCAGTAT TTACGCAACG
CTAACCAATA CTGGCGAAGT GTATTTTGAC TCGGTATCTA TGTTTACCTT TTTCTTATTG
TTGGGGCGCT ATTTGGAAAT GCGCGCGCGC CATAGCAATC AAAATAAAAG CCAGCATAAC
CTAAATTTAT TGCCTCTTAC CGCGCAAAAA GTACAAGACT CACAATATAT AACGGTACCG
CTAAAAAGCG TAAAAGTTGG CGATACGCTG CATATTGAAG CTGGGGCTGT TTTTCCTGCC
GATGGTACGG TTATAGCTGG TTCCACTACT GCAGATGAAT CTCTTTTAAC TGGCGAATCC
ACTCCTGTTA ATAAAACAAA GGGCTGCAGT GTTATTGCAG GCTCTGTGAA CGGCGATACG
GCCGTTACTA TCTGCGTAAC TGCAGTGGGC GACAACACCG CACTCTCGGT GATTGAAAAC
CTAGTTGATG AAGCGCAGCA GCAAAAACCT GCACAGGTAG CTTTTGCCGA TAAAATAGCG
GGCAAATTTG TGGCTGCGGT GTTGGTAGTT TCTTGCGTGG TGGGAGGGTA TTGGCTGTGG
CAAGATTCCT CGCGCGCGCT GTGGGTGGTG CTCTCGGTTT TGGTTATTAC ATGCCCCTGT
GCGCTTTCCC TTGCAACACC GGCAGCGCTT ACCGCTGGTA CAACTAAGTT GCGCGAGCAG
GGCTTTTTGG TGCGCAGTAA GCATGTTTTA GAAACGCTCG CAAAAATTAA TCACGTGGTA
TTTGATAAAA CAGGCACGCT TACCGCGGGG CAGTTCTCCA TCGAGCAAGT AGTTTGCGTG
CGTGAATCAT TTGACGAAGG CAGCGTACTT ACCCTCGTGG CGGCGCTCGA GGCGCACAGC
CGCCATCCCA TTGCTTCTGC ATTTAAACAC ATTCCTTTTA TCGAGCCCGC TTCGCAGGTA
TCTGTTATTC CAGGCCTAGG TATAGAGGGC GATTGGATGG GCGCGCGCTA CAAGTTTGGC
AAAAAAGAGT TGGCAGCCGA GCATGTAGAT TTCCCGCCTG CAATTTCTAG CAACAGCACA
GGGCTGTGGC AATGCTTAGC GGATAGCAAC GGCGTGGTTG CGTGGCTGTG CCTTAGCGAT
ACAGTGCGGC CAGAAACAGC AGAAGTGTTG AATGGGTTGC AGGCGCAAGG GTTGCGCACA
TCGCTACTTA GCGGTGATAG GCAGGCCAAT GTGGATAAAT TTGCGTTAAA CCTTGCGCTT
GCTCACCAAG CAGGTGACAT ATTGCCGCAG GGCAAGCTCG CTTACGTAAA CGAACATCAG
CAAGCCGGCG ATACCATAAT GATGGTAGGC GATGGTATTA ATGATGCGCC AGTGCTATCG
GGGGCAGACG TTTCTGTTGC CATGCCTAAG GCGACGGAGC TGGCGCAGAT AAAATCGGAT
GCGGTATTGC TACACGACAA TTTACACACG CTATTGCAGG CGCTTGCCAC CGCAAAGACT
GTACAGGCGG TTATTCGACA AAACCTTGCT TGGGCCTTGT TATACAATGT GCTGGCACTT
CCTGCGGCGG CTATGGGTTT AATTCCACCG TACCTTGCGG CGGCGGGTAT GAGTTTAAGT
AGCCTTGTCG TTGTAGTTAA CTCATTGCGC GTGGCACGCA CTTAA
|
|---|
| Protein sequence | MAHSCFHCGL PAHEQYSATV DGELRNFCCV GCQAVAMAIV EGGLGDFYQY RESTNPKVKE
VSQAYLEFDL HEVQADIISR VSQSTFRVRF YLESISCAAC AWLIENYLGQ TEAISRVSVN
ATTQICTIEW DKSKLPLSSL MHKLELIGYS PRPASSQAAA ESARNIQRSH LMRLGVAGIG
MMQVGMVAVA LYAGGIQGIE SGWQGFLRWV SFVFATPVML YSAQPFFYSA WRALKLKSLN
MDVPVCIALV LAYGASIYAT LTNTGEVYFD SVSMFTFFLL LGRYLEMRAR HSNQNKSQHN
LNLLPLTAQK VQDSQYITVP LKSVKVGDTL HIEAGAVFPA DGTVIAGSTT ADESLLTGES
TPVNKTKGCS VIAGSVNGDT AVTICVTAVG DNTALSVIEN LVDEAQQQKP AQVAFADKIA
GKFVAAVLVV SCVVGGYWLW QDSSRALWVV LSVLVITCPC ALSLATPAAL TAGTTKLREQ
GFLVRSKHVL ETLAKINHVV FDKTGTLTAG QFSIEQVVCV RESFDEGSVL TLVAALEAHS
RHPIASAFKH IPFIEPASQV SVIPGLGIEG DWMGARYKFG KKELAAEHVD FPPAISSNST
GLWQCLADSN GVVAWLCLSD TVRPETAEVL NGLQAQGLRT SLLSGDRQAN VDKFALNLAL
AHQAGDILPQ GKLAYVNEHQ QAGDTIMMVG DGINDAPVLS GADVSVAMPK ATELAQIKSD
AVLLHDNLHT LLQALATAKT VQAVIRQNLA WALLYNVLAL PAAAMGLIPP YLAAAGMSLS
SLVVVVNSLR VART
|
|---|
| |