Gene Sde_2384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2384 
Symbol 
ID3967904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3024039 
End bp3024530 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content43% 
IMG OID637921475 
Producthypothetical protein 
Protein accessionYP_527856 
Protein GI90022029 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00190826 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTATTC GCGTTGCACA GCTACTGTGC ATGTTGGTAA GCGTAACCGC TGCCAGCGTA 
TTCGCAGACG AGGGAACGAG TAAAAATGAG CAATGGTTGC TCGCAAAATA CGATGTTAAC
GGTGATAACG TTATCTCTGT TGACGAAATT AGTGAAAAAC GTCAAAAGCT ATACGCGGCG
ATGGATTTAG ATGCCGACGG TGGTGTAACG TTTGGTGAAT ATGAATATGT CGACGGTGTA
AAGCGCCAAA TGCTGTTAAA AGCGCGCTTT AATAAATTAG ACTTAGATCA AGATGGCAAA
CTGAGCTCCA GCGAGTACTG CTCTTACTTA GGCAGTTTCG ACCGCTTTGA TCAAAATGGT
GATGGCAATA TCACCACATC AGAAATAGAC ATGTCTAAGG TGAAGGCTGC AAAAGAAAAA
CCTGCGCCAG TAAAAGCTGA AGACGATACC AGTTGCTTGC TTTGGTTTTG TGTTAGGTCT
TCCATTAAAT AG
 
Protein sequence
MSIRVAQLLC MLVSVTAASV FADEGTSKNE QWLLAKYDVN GDNVISVDEI SEKRQKLYAA 
MDLDADGGVT FGEYEYVDGV KRQMLLKARF NKLDLDQDGK LSSSEYCSYL GSFDRFDQNG
DGNITTSEID MSKVKAAKEK PAPVKAEDDT SCLLWFCVRS SIK