Gene Sde_2361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2361 
Symbol 
ID3967394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2991482 
End bp2992339 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content44% 
IMG OID637921452 
Productexonuclease 
Protein accessionYP_527833 
Protein GI90022006 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.13094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.909289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAATA CGAGAACACT AACATTACTC CCGCTTTTAC TGGCACTGTG CATTTGCGGC 
GGAGCTATGG CGGCAGAGTT AAAAGTAAAC AAAGTGAATG GCGCCAAAGA AGAGCTTATC
TACTCTATTC TTGAGCTTGC CTTAGCTAAG GTAGACCCCG AAACGAAACC TAAGCAATTA
AAAGATGAAC TCCCCCTTGG CAGGCTCGCC AAAGCGGTGG AAAACAACAC TATAGATATA
ATGTGGGCCG GCTCTTCGGC AGATTACGAT AACCGGCTAC TCGCCATTCG CATCCCCCTA
CTAAAAGGCT TACTCGGCCA CCGAGTGTTT ATTATAAAGC CCGAAAACCA ACCTAAGTTT
GATTCCGTTA AAACACTAGA AGACCTCGCC AAACTACAAG CAGGCCTAAA CTCGCGCTGG
GGCTCTACAC GGGTACTTAA AAACGCAGGG TTAGATGTGG TTGAATCGAC TAGCTATGAG
AATTTATTTC ATATGCTTGA TAGCGGCAGG TTCGACTTTT ACCCACGCGC GGTGCACGAG
CCCTGGGTAG AACTACAGGA TCGCCCAGAG CTAAATTTAG CCATAGAAAA AAACATTCTT
ATTATTTACC CCTACGCTAT GCACTTTTAC GTTAAAAAGA ACAATAGGCC CCTTAAAGAC
TTTATTGAAA AAGGCCTAGA AATGGCCATT GCAGATGGCA GTTTTGACGA ACTATTTTTT
AACAACCCAA TGATAAAAAA AGCCATTGAA GATACTGGCT TTCAGCGTAG AACTATTATT
CGCATCCCCA ACCCTTTTCT GCACCCAGAT ACACCGCTCC AACGAAAAGA ACTTTGGCTA
GATGTAGAAA AGCTGTAA
 
Protein sequence
MRNTRTLTLL PLLLALCICG GAMAAELKVN KVNGAKEELI YSILELALAK VDPETKPKQL 
KDELPLGRLA KAVENNTIDI MWAGSSADYD NRLLAIRIPL LKGLLGHRVF IIKPENQPKF
DSVKTLEDLA KLQAGLNSRW GSTRVLKNAG LDVVESTSYE NLFHMLDSGR FDFYPRAVHE
PWVELQDRPE LNLAIEKNIL IIYPYAMHFY VKKNNRPLKD FIEKGLEMAI ADGSFDELFF
NNPMIKKAIE DTGFQRRTII RIPNPFLHPD TPLQRKELWL DVEKL