Gene Sde_2310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2310 
Symbol 
ID3968140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2934523 
End bp2934972 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content44% 
IMG OID637921401 
Producthypothetical protein 
Protein accessionYP_527782 
Protein GI90021955 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.542995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00649849 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCCTA GTAACCTAAT TATTAAATCT CAAATGCAAA TCCATCGGCC GGTGGCAGAA 
TGTTGTGAGG CATTCGTTAA CCCTGAAGTT ACTACTAAAT TTTGGTTTAC TAAAAGTAGT
GGTCGGCTTG AAGAGGGCAA AAAAGTACGC TGGGATTGGG AGATGTTTGG GGTGGGTGAC
TTTCTTACCG TTACGGAGTT AAAAGAAAAT AAACGCATAC TCATCGAATG GGAGAGTGAC
GCCATATTTG TAGAATGGTG TTTTGAAGAC TGGAACGGGA GCGCGACGTT AATTACAATT
TCTACTTGGG GTTTTTCTGG CAACAGTGAG GAATTATTGC TTCAAGCAGT GGATACGAAG
GGAGGGTATA CAATGGTGCT TGCGGGGTTA AAAGCTTGGC TAGAACACGG CGTAGAGCTT
GGCTTGGTGC GGGACCAGTT TCCTAGTTAG
 
Protein sequence
MNPSNLIIKS QMQIHRPVAE CCEAFVNPEV TTKFWFTKSS GRLEEGKKVR WDWEMFGVGD 
FLTVTELKEN KRILIEWESD AIFVEWCFED WNGSATLITI STWGFSGNSE ELLLQAVDTK
GGYTMVLAGL KAWLEHGVEL GLVRDQFPS