Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2310 |
Symbol | |
ID | 3968140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2934523 |
End bp | 2934972 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637921401 |
Product | hypothetical protein |
Protein accession | YP_527782 |
Protein GI | 90021955 |
COG category | [S] Function unknown |
COG ID | [COG3832] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.542995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00649849 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCCTA GTAACCTAAT TATTAAATCT CAAATGCAAA TCCATCGGCC GGTGGCAGAA TGTTGTGAGG CATTCGTTAA CCCTGAAGTT ACTACTAAAT TTTGGTTTAC TAAAAGTAGT GGTCGGCTTG AAGAGGGCAA AAAAGTACGC TGGGATTGGG AGATGTTTGG GGTGGGTGAC TTTCTTACCG TTACGGAGTT AAAAGAAAAT AAACGCATAC TCATCGAATG GGAGAGTGAC GCCATATTTG TAGAATGGTG TTTTGAAGAC TGGAACGGGA GCGCGACGTT AATTACAATT TCTACTTGGG GTTTTTCTGG CAACAGTGAG GAATTATTGC TTCAAGCAGT GGATACGAAG GGAGGGTATA CAATGGTGCT TGCGGGGTTA AAAGCTTGGC TAGAACACGG CGTAGAGCTT GGCTTGGTGC GGGACCAGTT TCCTAGTTAG
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Protein sequence | MNPSNLIIKS QMQIHRPVAE CCEAFVNPEV TTKFWFTKSS GRLEEGKKVR WDWEMFGVGD FLTVTELKEN KRILIEWESD AIFVEWCFED WNGSATLITI STWGFSGNSE ELLLQAVDTK GGYTMVLAGL KAWLEHGVEL GLVRDQFPS
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