| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2294 |
|---|
| Symbol | |
|---|
| ID | 3967347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 2918993 |
|---|
| End bp | 2919832 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637921385 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_527766 |
|---|
| Protein GI | 90021939 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000192457 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATAGAAG TAGTTGTTGG CTTAATCATT GGCTTAGTTT TAGGTTTAAC AGGGGCTGGC
GGGTCTATAT TTGCCGTACC ACTTTTGCTC TTAGCCACAC CAATGAACCC AAGCGATGCT
ATGGGCATGG CACTTGGCGC CGTTGCTGTA ACAGCGTTGT ATGCCACAGC CTCGCAAAGT
ATTAACCGCA AAAATAGCGG CATCCTGTGG ACACCCGCGA TTATATTGGC CGCGTCGGGT
GCGTTAACCG CGCCGCTTGG CAAATGGGCT TCTACGCTAT TTACGCCGCA CGTTTTACTA
GCAGGCTTTA CTTGTGTTGC AGTGCTTATT GCCGTACGCA TGTGGATACA AGCCAACCGT
CGCCCAGAAG AAACAACAAG CGTAAGGGCC AACGATGGTG ATAGCGATTT AACAACCCCG
GCGACTATGG CTTGCAAATT AAGCCCTACC GGCCAGTTTC TATTGCGGCC TAAATGTATT
TCTGGGTTAG GGGTTGGTGG TTTAGCTATA GGCTTTGCTT CAGGTTTGTT TGGCGTGGGT
GGTGGTTTTT TAATTATCCC TCTACTGCTG TTTTTAAGCC AAATAGCAAT GCGTAATGCG
GTGGCCACTT CGTTAGCAAT AATTGCCGCG GTAAGCTCTA GCGGTTTTGC AAGCCATTTA
GTGTTGGAAT ACAGCAACAA TCAAACATTT GACTGGCTTA ATTTTATAAA ACTAAGTGGT
GCAAGTTTAA CCGCTATGTT TATTAGCCAA CGTATTAGTC GCGCCATTGC AGGCCCGCTT
TTACAAAAAA TATTTTCGGT AGCTTTAGTG CTTGTTTCGG TTATTTCAAT ACTAAAGTAA
|
|---|
| Protein sequence | MIEVVVGLII GLVLGLTGAG GSIFAVPLLL LATPMNPSDA MGMALGAVAV TALYATASQS
INRKNSGILW TPAIILAASG ALTAPLGKWA STLFTPHVLL AGFTCVAVLI AVRMWIQANR
RPEETTSVRA NDGDSDLTTP ATMACKLSPT GQFLLRPKCI SGLGVGGLAI GFASGLFGVG
GGFLIIPLLL FLSQIAMRNA VATSLAIIAA VSSSGFASHL VLEYSNNQTF DWLNFIKLSG
ASLTAMFISQ RISRAIAGPL LQKIFSVALV LVSVISILK
|
|---|
| |