| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2287 |
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| Symbol | |
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| ID | 3967340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2908669 |
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| End bp | 2910051 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637921378 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_527759 |
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| Protein GI | 90021932 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000712178 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000369164 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAAGGG CGTTGATAGT AGACGACTCC AAAACCGCTC AGGTTAGACT GCGTAAAATG
TTATCCCGCT ACGATTTAGC GGTAGATATA GTATCAAGTG CAGAAGAGGC GTTAGGGTAT
TTAAGTTACC GTATGCCTGC CGTGGTGTTT ATGGATCACC ACATGGAGGG TATGGATGGT
TTTGAAGCGT TAAAAATTAT TAAAGCCAAC CCCAATACTG CCACTATTCC GGTCATTATG
TACACATCGC AAAAAGGGGA TGTGTACGTT GGTCAGGCGC GTGCGTTAGG CGCATTAGAT
ATTCTTTCTA AAGAAATCAT TAAGCCCTCG AGTTTAGAGC GGGTGTTAGC GTGCCTGCAT
ATTGTACCTA AAGGCGAAGC CGAAGATGCT GCGGTAGCAA CTAAACCGGT GAATACGGTT
ATAGACCCCG TAAGTATGCC CGCCGAAAAA ACCCATGTAG ATTTGCCACC AGCTAACGAT
GAAGACCCCG TGTTAGTGAA GGTGCAAACG CAAGTTGCCA AACTATTTGA AATGCACATT
GCCGATGTGC GCCAGCAAAT TGCCGATAAT TCGCGTTTTA TTGTTCGCAG GTTAAGTGGT
GAGCTTGAAA AAAACCAGAA AACGGAACCT ACCATCGATG ATGTGCCGGT TTCTGTGTTA
AATGCCGAAT TAACTGCAGA AAATAGGCGC GGGCAGTTTA TATCTAGCTC GTTGCTGTTT
TTAATTTTTA TTGGCTTAGG GTTAATCGCG TGGGAGCTAT ACGACAGTAA GCGCGATAAT
CAATTTATCA AGCAGCAGTA TTCGCAATTA ATGAAGCTGA ATACCGATAA TCAAGCTTTA
ATATCCAGCT TAACGGAATA CCTTTCTGCA CAGGAAACCG AGCACGGTTT AGATGGCGTA
GACCCAGCCG TAATGGATGT AGTGAGTTGG GCGTTAGAGA ATAATATGCA CTTTGACTAC
GGCGCACAGC CTTTAGGTGA AGAGCAAATT GTTAAACTTA ATGCCCTAAC GTACCAATTA
GCTGCGGCAG GTTTTACCGG GTTGGTAGAG CTAGATATTC ACTTTGGTAA CTTTTGTGTA
CAAATGAATA GCGCAGGCGA TTGGGTGTTA GCCGCGCCCG AAACGTTGGT TCAAAACTGC
GTATTAGTGT CGGATTTAAA CAGAGAATAC CAAGTAGGCG ATTATTTAAG TATGCCGTTT
TTGGGGTATG AGCAAAATGC TCAGCCAATT AAAGAGGGTA GAATTAGTGT TAGTTTAGGT
GTGAGCGGTT TAGCGCAACC TAAAATGGCT TACCCTGAGC CTATAGAAAC AGTAACAGCT
GGGCAGTGGA ATGCCATTGC CGCGAAAAAT AATCGTATTT CTGTTGGGTT TAGTTATTTG
TAA
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| Protein sequence | MQRALIVDDS KTAQVRLRKM LSRYDLAVDI VSSAEEALGY LSYRMPAVVF MDHHMEGMDG
FEALKIIKAN PNTATIPVIM YTSQKGDVYV GQARALGALD ILSKEIIKPS SLERVLACLH
IVPKGEAEDA AVATKPVNTV IDPVSMPAEK THVDLPPAND EDPVLVKVQT QVAKLFEMHI
ADVRQQIADN SRFIVRRLSG ELEKNQKTEP TIDDVPVSVL NAELTAENRR GQFISSSLLF
LIFIGLGLIA WELYDSKRDN QFIKQQYSQL MKLNTDNQAL ISSLTEYLSA QETEHGLDGV
DPAVMDVVSW ALENNMHFDY GAQPLGEEQI VKLNALTYQL AAAGFTGLVE LDIHFGNFCV
QMNSAGDWVL AAPETLVQNC VLVSDLNREY QVGDYLSMPF LGYEQNAQPI KEGRISVSLG
VSGLAQPKMA YPEPIETVTA GQWNAIAAKN NRISVGFSYL
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