| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2278 |
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| Symbol | |
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| ID | 3967954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2896925 |
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| End bp | 2898415 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921369 |
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| Product | cellulose-binding family II protein |
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| Protein accession | YP_527750 |
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| Protein GI | 90021923 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0826751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG CCAATTTTAA CGTTTTACAT TTTAGCGACC CCAAAGTGCG CACCTTGCAT
TTGGCTTGGA TTGCCTTTTT CATCACCTTC TTTATGTGGT TTTGCCATGT ACCCTTAATG
CCACTTATTA AGGATACCTT TGGCTTGAGC ATGGCAGAGG CAAAAGCACT GCTATTTCTA
AACGTTGCCC TTACTATTCC TGCCCGCACC ATTGTGGGCT CGCTGGTAGA TAAATACGGC
CCACGGGTAA TGTACTCTGC GCTACTCGCT ATTTCTGGCT GTATTTGCTT TATGTTTGCT
TGGGCGCAAG ATTACACCCA ACTAGCCGCT GCCCGCTTTT TGCTCGGTTT TGCTGGTGCC
GGCTTTGTAA TTGGCATTCG TTTGGTTACC GACTGGTTCC CAGCTAAAAC CGCTGGTGCG
GCACAAGGCA TATACGGTGG CTGGGGTAAT TTTGGGGCAG CTATCGCTAA CTGGGCACTC
CCTGCCATGT CATCGATTCT AATTGGTTAT GTTGGCGTGG CCTATAGCTG GCGCGTAGCG
ATTACTATCG CGGGCGTAGT TGCCATAGGT TACTCATTTA TTTTTTACAT TATGGTGCGC
AACACCCCTA AAGGCGCCAC CTATTTCGCC CCCAAAAAAG TGGGCGCTAT GGAAGTATCC
AACAAAGCCG ACTTTGTGCT GTATATGATA ATGCTCTCGC CCATATTCTT GGCTATGGGC
GTAATATGCT GGCGCTTATC ACCGGCGCAG GTTGGCCTAC TTTCCGAATT CGTTACCTAC
GCTATTTGGG CCGGGCTATT GCTTTGGTTT TGCTGGCAAG CCTTCGGGGC CTACAAACTA
AATGCTGAAG CTATCCACGA AGGTGTTGTT GGCATTCACA AATACAAATT CAAGCAAGTT
GCCCTTTTGG ATCTTTCCTA CGCCGTTACT TTCGGCTCTG AAGTAGCAGT GGTATCTATG
ATGCCGTTGA TGTTCTCTAA CGAAGACACC TATGCATTTA GCTTGGCCAA AGCCTCGGTT
ATGGCTGGCT GCTTTATGGC AATGAACCTT ATTGCCCGCC CAGGCGGTGG TTGGTTAAGC
GATAAGCTAG GCCGCAAAAA AACCTTAATG TTAACGGTAG CTGGCTCTGC AATTGGTTAT
GCGGGGCTAT CTATGATGAC GCCAGATTGG TCGCTACTCG CCATTGGTGC TGTAGTTGTT
TTCTGTTCTT TCTTTGTACA GGCTGGCGCC GGTGCCACCT TTGGCGTTGT GCCCACCATT
AAACGCCGCC TAACTGGCCA AATAGCCGGC ATGACCGGTG CCTACGGCAA CGTAGGTGCA
GCATTGTTTT TACTTGTAAA TTCATTTTAC GCACCTAATG TTTTCTTTGG TGTGATTACA
GGGGCCTGTA TTGTTGTATT GGGCTTACTG TTTTTATTTA TGGAAGAGCC CAAAGGCCAA
ATTGCCGAAG TACTTCCAGA TGGCACCGTT GAAATGATTG ATGTAGGCTA A
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| Protein sequence | MSTANFNVLH FSDPKVRTLH LAWIAFFITF FMWFCHVPLM PLIKDTFGLS MAEAKALLFL
NVALTIPART IVGSLVDKYG PRVMYSALLA ISGCICFMFA WAQDYTQLAA ARFLLGFAGA
GFVIGIRLVT DWFPAKTAGA AQGIYGGWGN FGAAIANWAL PAMSSILIGY VGVAYSWRVA
ITIAGVVAIG YSFIFYIMVR NTPKGATYFA PKKVGAMEVS NKADFVLYMI MLSPIFLAMG
VICWRLSPAQ VGLLSEFVTY AIWAGLLLWF CWQAFGAYKL NAEAIHEGVV GIHKYKFKQV
ALLDLSYAVT FGSEVAVVSM MPLMFSNEDT YAFSLAKASV MAGCFMAMNL IARPGGGWLS
DKLGRKKTLM LTVAGSAIGY AGLSMMTPDW SLLAIGAVVV FCSFFVQAGA GATFGVVPTI
KRRLTGQIAG MTGAYGNVGA ALFLLVNSFY APNVFFGVIT GACIVVLGLL FLFMEEPKGQ
IAEVLPDGTV EMIDVG
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