| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2277 |
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| Symbol | |
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| ID | 3967953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2895135 |
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| End bp | 2896607 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921368 |
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| Product | nitrate transporter |
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| Protein accession | YP_527749 |
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| Protein GI | 90021922 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.204683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCCG GTAAATTAAA TCTTTTAGAT TTTACGAAAG AGAACATAAG AACACTCCAC
CTTACGTGGT TTGCGTTCTT TTTAACTTTT GTTGTGTGGT TTTCGCACGC ACCACTTAAG
CCACTTATTA TGCAAGCGTT TGATATGTCG CTTGCACAAT GGAAAGCGCT ACTTATATTA
AACGTGGCAC TCACCATTCC CGCCCGTATT GTTATTGGTA TTTTGGTTGA TAAATTTGGG
CCTCGAATTG TATACAGCGC GCTGCTCGTC ACGTCTGGCT TTTTGTGTGT TGCGTTTGCC
TCTTCACAAT CATACGAACA ACTAGCACTA CTGCGTTTTG CCATGGGTTT TGTTGGCGCA
GGCTTTGTAA TTGGTATTCG CATGGTTGGT GAATGGTTCC CTGCCCGCCA AGTAGGCTTA
GCAGAGGGCG TTTACGGCGG CTGGGGCAAC TTTGGTTCTG CAGCAGCAGC CTTTACCCTA
CCTACTCTCG CGCTTATATT TGGTGGCGAT GACGGCTGGA GATACGCTAT AGGCATTACC
GGTGTAATAG CAGGCTTCTA CGGTATTTTC TTCTACTGGC GTGCACGCAA TACACCTAAA
GGCTCTACTT ACTTCAAACC TAAAAAGTCT GGCGGCTTAG AAGTAACAAG CAAGCGCGAT
TTCTGGTTCT ACATCGCAAT GAATGTACCT ATGTACTTAA TTCTTGCTGT ACTAGCTTGG
AAACTATCGC CTTCAGGTGT AAACCTACTA ACCCAAACAG CCGTTAACGT TTTGTACGTT
GGCTTGGTTG CTCTGTTTAT TTTCCAGTTC ACGCAAATCT ACAAAGTGAA CAAAGATATG
CTTAAAAACG GCGCACCAGA GCACGACAAA TACCCATTTA AACAGGTTGC CGTATTAGAT
TGGGCTTACT TTGTAACCTT CGGCTCTGAG TTGGCTGTAG TTTCTATGCT ACCTGCCTTC
TTCTTAGAAA CCTTCACCGA CCTTTCCTTA GCTCAAGCGG GTATGCTCGG CGCGGCATTT
GCCTTTATGA ATCTTATCGC CCGCCCAGGT GGTGGCTACA TCAGCGACAG ATTTGGTCGC
CGTAAATCAC TATCTATATT CATTGCCGGT TTAGCAGTGG GTTACTTTGT ACTGTCTCAA
GTAGGTGCAA GCTGGCCTGT AGCGGCTGCA GTATTGGCTG TAATGTGCTG CTCTTTCTTT
GTGCAAGCGG GTGAAGGTGC TGTATTTGCC ATGGTACCGC TCATTAAGCG TCGTATGACT
GGCCAAATAG CCGGTATGGC GGGCGCCTAC GGTAACGTGG GAGCGGTAAC CTTCCTAACC
GTATATAGCT TTGTAGATGC GAGCACCTTC TTTATGATTA TTGGTGCCTC TGCAGCTGTA
GTGTTCGGTA TTGTACAATT TATCGAGGAA CCACAAGGTC ACACCACCGA AGTAATGGAA
GACGGTACCG TACAAAAGAT TGAAGTAAGT TAA
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| Protein sequence | MSSGKLNLLD FTKENIRTLH LTWFAFFLTF VVWFSHAPLK PLIMQAFDMS LAQWKALLIL
NVALTIPARI VIGILVDKFG PRIVYSALLV TSGFLCVAFA SSQSYEQLAL LRFAMGFVGA
GFVIGIRMVG EWFPARQVGL AEGVYGGWGN FGSAAAAFTL PTLALIFGGD DGWRYAIGIT
GVIAGFYGIF FYWRARNTPK GSTYFKPKKS GGLEVTSKRD FWFYIAMNVP MYLILAVLAW
KLSPSGVNLL TQTAVNVLYV GLVALFIFQF TQIYKVNKDM LKNGAPEHDK YPFKQVAVLD
WAYFVTFGSE LAVVSMLPAF FLETFTDLSL AQAGMLGAAF AFMNLIARPG GGYISDRFGR
RKSLSIFIAG LAVGYFVLSQ VGASWPVAAA VLAVMCCSFF VQAGEGAVFA MVPLIKRRMT
GQIAGMAGAY GNVGAVTFLT VYSFVDASTF FMIIGASAAV VFGIVQFIEE PQGHTTEVME
DGTVQKIEVS
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