| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2273 |
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| Symbol | |
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| ID | 3967949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2890211 |
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| End bp | 2891347 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637921364 |
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| Product | hypothetical protein |
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| Protein accession | YP_527745 |
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| Protein GI | 90021918 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.875367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.763952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAGTA CTCGACACCT TTTTCACAAC ATTAAAAAAA CACTCCATAT ACGACAGCTA
GGCGTTATGG CAGGTTTTAC GAGCTGTTTA TTTCTGAGTA CCCACGGGTA TGCAGATATC
TACTTCTCTG CAAAAACAGT GGGGCCTTCA AGCAGTATTT ATAGTAAAAG CTCTGAAACT
AGCGCACCCA TAAAGCAGAT AACAAACGAT AACCGCTGGC GAGATTTAGC CTTTGATGTA
GGAAAAAATA AAATTGTTTT TATGTCTAAC AGGCATACAA ATACAGGGAT AGATTTACGT
AAGCAGTCGG AGCAATTTAA TATTTACCTT ACCTCCACGG CTGGGGGCGA ACCCCAAGTA
CTCGCCAACA CCAATCTGGA TGAAACTTAC CCCAAATTAA ACTCTAGCGA AACTATTGTT
GCTTATACGC TTAAAGAACA ACCCCAAGAA CAATTGGTAT TGCTAGATAT AGAAACCCGA
AAACCAATCA CTACAATTAA TGCAGCGGCT ATTATTGACT ATTCTTGGCA CCCACAAAAT
AATCAAATTG CAATTATTAC CGATAACGCA GACAACACCA ATATAGCCAT ATACGATGTA
AAAAAACAAA AAAGCAGCCA AATATTTAGC CTGAGTAAAA AAGACAACTC TACACTTTCC
TATATTAGCT GGGCACCCAA TGGTAAGAAC CTAGCTTTTA TTGTTAACCC CGGTAAGCCA
ACAGCAAAAC GACAACTCAA GTTGTTAAAT TTAGCTACCA ATAAAGTAAG CCCAATATCC
CAACCCGATC AAGAAGTACA ATCTCCAGTA AGCTGGGCGC CAGACAGCAA GAGCCTCACC
TATTCCGCGC TGCTTAACTA TAAATACTAT TTCGACGAAA CCACCTATAA AAAAGTATAC
GAAGGCGAAA TGCATATTTT TGTAGCCGAT ACGGAAGGAG CCTTACGACA AGTAACCACA
GGCAAGCATT TGCATAACAA ACCTGAGTTT TCACCAGATG GCAAACAAAT AGCATTTCTA
TTCGCAGAAG ATTTAAGTCA ACACACAGCT GCGTTGCGAA TAGTGGACCT AAATGGAAAA
GTGCTAAACG AGCTTTTCAA GCCCGTTCAC GGCAATTCAG AAATAGTGTG GAAATAA
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| Protein sequence | MLSTRHLFHN IKKTLHIRQL GVMAGFTSCL FLSTHGYADI YFSAKTVGPS SSIYSKSSET
SAPIKQITND NRWRDLAFDV GKNKIVFMSN RHTNTGIDLR KQSEQFNIYL TSTAGGEPQV
LANTNLDETY PKLNSSETIV AYTLKEQPQE QLVLLDIETR KPITTINAAA IIDYSWHPQN
NQIAIITDNA DNTNIAIYDV KKQKSSQIFS LSKKDNSTLS YISWAPNGKN LAFIVNPGKP
TAKRQLKLLN LATNKVSPIS QPDQEVQSPV SWAPDSKSLT YSALLNYKYY FDETTYKKVY
EGEMHIFVAD TEGALRQVTT GKHLHNKPEF SPDGKQIAFL FAEDLSQHTA ALRIVDLNGK
VLNELFKPVH GNSEIVWK
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