| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2268 |
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| Symbol | |
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| ID | 3967944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2879749 |
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| End bp | 2881020 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637921359 |
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| Product | membrane-fusion protein |
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| Protein accession | YP_527740 |
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| Protein GI | 90021913 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.250456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTTGA ACGATAAACC CCTCATTATT AAACTGCTTC CCCTTATTGG TCTTCTCGGT
GTTATTGCAA TAGTCATTGC CGCGTTACTG CTAACCAGAC CGAAAGCTGA CCGGTCCTTC
ACCCCGCCCG AAACACAGGT GGCTATTGCA GTTAATACAC TCGAGGCCAA ACCTTATACC
GTTCAAATCC AGTCTTACGG GTTGGTGCAA CCTCGCATTC AAACCCAGCT CACAGCCCAA
GTGGGCGGTA AAGTAGATTT TGTGGCCGAA TCGTTTCGCG ACGGGGGATT TTTTGAAGCC
GGCGAAACAC TCATCGCTAT AGAACAAGCC GATTATTTGA TAGCGGTAAC TGCGGCCGAG
GCCAGCTATC TGGAAGCCGA GCAAGCATTA ATAGAAGAGC AAGCCCGCGC AGAACAAGCG
CGTTTAGACT GGTCGCGCTC TGGCAGCAAC CACAATCCTG CGCCCTTAGT GCTAAGAGAA
CCTCAAGTCG CAGCAGCCAA AGCGCGCTTA AAAGCTGCAG AAGCAAACTT GGCAGGCGCA
AAGCTCGATT TAGCGCGCAC AAAAATTAAA GCCCCCTATA GCGGCAGAGT ACTTACCAAA
CACGTAGATA TTGGCAACGT TATAAGCACT AACAGTGCAC TGGCAGACAT TTACGCTACC
GATGCAGTCG AGGTTAAACT CCCCATTAGG AACAACGAAA TTAACCTGCT GCAACTGCCA
GAAACCTATC GCGTAGCCAC TCAAGCACCC TCGCAATTAC CGCGCGTTAC GCTTGTCTCT
GACCTCGTCG AAAAAAGCGA ATGGGAAGGC TCAATTGTGC GTACATCTGG CGCGATAGAA
ACCGACAGCA GACAAATCTA TGTGGTCGCT CGAGTAGAAG ACCCCTTCGG CGAAAAAGCG
TTAAACAAAA CACCGTTAAA AATTCGCCAA TACGTAACGG CCAATATTGA AGGCAAAACC
CTCCCCAATG CGATTGTTAT TCCTAACAAA ACCATCTACC AAGGCTCGTA TGTATATTTA
TACCGCGATG GGCAAGTGCA TAGGCAACCT ATAAAAGTAC TATGGCAAAA TGAAACGGAT
GCAATTATTG CAGAAGGCTT AACCAACGGT GATCAACTAG TTGTTACCCC GCTTGGGCAA
GTAGCATCTG GCACGCGAGT AAAAATAAGC GGCGCACCAA GCAGTAATGG TGGAGAAAAA
CGCAAAGGCG AATGGAAGAA AGACGGCCCA CGCGAAAATA GAAAGCAACG TGAAGAAGGA
GCCGCTAAAT GA
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| Protein sequence | MVLNDKPLII KLLPLIGLLG VIAIVIAALL LTRPKADRSF TPPETQVAIA VNTLEAKPYT
VQIQSYGLVQ PRIQTQLTAQ VGGKVDFVAE SFRDGGFFEA GETLIAIEQA DYLIAVTAAE
ASYLEAEQAL IEEQARAEQA RLDWSRSGSN HNPAPLVLRE PQVAAAKARL KAAEANLAGA
KLDLARTKIK APYSGRVLTK HVDIGNVIST NSALADIYAT DAVEVKLPIR NNEINLLQLP
ETYRVATQAP SQLPRVTLVS DLVEKSEWEG SIVRTSGAIE TDSRQIYVVA RVEDPFGEKA
LNKTPLKIRQ YVTANIEGKT LPNAIVIPNK TIYQGSYVYL YRDGQVHRQP IKVLWQNETD
AIIAEGLTNG DQLVVTPLGQ VASGTRVKIS GAPSSNGGEK RKGEWKKDGP RENRKQREEG
AAK
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